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Thu, 30 May 2013 10:31:23 +0000 (UTC) From: "Justin Lecher" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" Message-ID: <1368605369.e2ebd47001ac3f20d9f10b3fea8091dacdfa757b.jlec@gentoo> Subject: [gentoo-commits] proj/sci:ccp4 commit in: / X-VCS-Repository: proj/sci X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher X-VCS-Revision: e2ebd47001ac3f20d9f10b3fea8091dacdfa757b X-VCS-Branch: ccp4 Date: Thu, 30 May 2013 10:31:23 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 8da7e24f-64e7-4ccc-99ea-f74a24db8eb9 X-Archives-Hash: 02e8e74377c8be0e658b7a982b66ecfd Message-ID: <20130530103123.aE9jQ869iLmGPdZSSIXagM4LfotGTFT9Oes-RW6C4EI@z> commit: e2ebd47001ac3f20d9f10b3fea8091dacdfa757b Author: Andreas Schäfer gmx de> AuthorDate: Wed May 15 08:09:29 2013 +0000 Commit: Justin Lecher gentoo org> CommitDate: Wed May 15 08:09:29 2013 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=e2ebd470 Merge https://github.com/gentoo-science/sci dev-lang/berkeley_upc/ChangeLog | 6 + dev-lang/berkeley_upc/Manifest | 2 +- ...pc-2.16.0.ebuild => berkeley_upc-2.16.2.ebuild} | 0 dev-lang/berkeley_upc_translator/ChangeLog | 8 + dev-lang/berkeley_upc_translator/Manifest | 2 +- ...build => berkeley_upc_translator-2.16.2.ebuild} | 5 +- ...keley_upc_translator-2.16.0-stackoverflow.patch | 18 - dev-python/pysparse/ChangeLog | 11 +- dev-python/pysparse/Manifest | 3 +- dev-python/pysparse/metadata.xml | 4 +- dev-python/pysparse/pysparse-1.1.1-r1.ebuild | 60 + dev-python/pysparse/pysparse-1.1.1.ebuild | 53 - dev-python/pysparse/pysparse-1.1.ebuild | 53 - media-gfx/brlcad/ChangeLog | 5 +- media-gfx/brlcad/Manifest | 1 + .../{brlcad-7.20.4.ebuild => brlcad-7.22.0.ebuild} | 16 +- media-gfx/brlcad/brlcad-9999.ebuild | 8 +- sci-biology/mira/ChangeLog | 6 + sci-biology/mira/Manifest | 1 + .../mira/{mira-3.9.9.ebuild => mira-3.9.15.ebuild} | 9 +- sci-chemistry/curvefit/ChangeLog | 3 + sci-chemistry/curvefit/curvefit-1.40.ebuild | 6 +- sci-chemistry/gromacs/ChangeLog | 10 + sci-chemistry/gromacs/Manifest | 2 + .../files/gromacs-4.5.7-cmake-cpp-asm.patch | 43 + ...gromacs-9999.ebuild => gromacs-4.5.9999.ebuild} | 65 +- sci-chemistry/gromacs/metadata.xml | 1 + sci-chemistry/modelfree/ChangeLog | 12 + sci-chemistry/modelfree/modelfree-4.20.ebuild | 33 +- sci-chemistry/ucsf-tools/ChangeLog | 8 + sci-chemistry/ucsf-tools/Manifest | 2 + sci-chemistry/ucsf-tools/metadata.xml | 31 +- sci-chemistry/ucsf-tools/ucsf-tools-9999.ebuild | 6 +- sci-libs/mkl/ChangeLog | 5 + sci-libs/mkl/Manifest | 4 + ...mkl-11.0.2.146.ebuild => mkl-11.0.3.163.ebuild} | 4 +- sci-libs/nfft/ChangeLog | 28 - sci-libs/nfft/Manifest | 1 - sci-libs/nfft/metadata.xml | 9 - sci-libs/nfft/nfft-3.2.2.ebuild | 32 - sci-mathematics/scilab/Manifest | 2 +- .../scilab/files/scilab-5.4.0-builddocs.patch | 353 - .../scilab/files/scilab-5.4.0-fortran-link.patch | 22 - .../scilab/files/scilab-5.4.0-java-heap.patch | 12 - ... scilab-5.4.1-fix-random-runtime-failure.patch} | 0 ...wlinks.patch => scilab-5.4.1-followlinks.patch} | 0 ....0-gluegen.patch => scilab-5.4.1-gluegen.patch} | 0 .../scilab/files/scilab-5.4.1-java-heap.patch | 14 + .../{scilab-5.4.0.ebuild => scilab-5.4.1.ebuild} | 45 +- sci-physics/lammps/ChangeLog | 31 + sci-physics/lammps/Manifest | 1 + .../lammps/files/Makefile.gentoo-serial.patch | 111 + sci-physics/lammps/lammps-20130512.ebuild | 65 + sci-physics/lammps/metadata.xml | 32 + sys-cluster/lustre/ChangeLog | 52 + ...01-LU-1812-kernel-3.7-FC18-server-patches.patch | 380 + ...rnel-3.0-SuSE-and-3.6-FC18-server-patches.patch | 21302 ------------------- ...el-sock_map_fd-replaced-by-sock_alloc_fi.patch} | 4 +- ...-kernel-Kernel-update-for-3.7.2-201.fc18.patch} | 22 +- ...at-posix_acl_-to-from-_xattr-take-user_n.patch} | 12 +- ...05-LU-2800-llite-introduce-local-getname.patch} | 16 +- ...tch => 0006-LU-2987-llite-rcu-free-inode.patch} | 8 +- ...0-kernel-3.8-upstream-removes-vmtruncate.patch} | 8 +- ...2850-kernel-3.8-upstream-kills-daemonize.patch} | 167 +- ...d-make-AC-check-for-linux-arch-sandbox-f.patch} | 10 +- ...rnel-3.9-hlist_for_each_entry-uses-3-args.patch | 8 +- ...79-kernel-f_vfsmnt-replaced-by-f_path.mnt.patch | 10 +- ...uild-fix-compilation-error-with-gcc-4.7.2.patch | 43 + ...fids-fix-compilation-error-with-gcc-4.7.2.patch | 29 - ...7-build-zfs-0.6.1-kmod-dkms-compatibility.patch | 1038 - sys-cluster/lustre/lustre-9999.ebuild | 29 +- 71 files changed, 1196 insertions(+), 23206 deletions(-)