[gentoo-commits] gentoo-x86 commit in sci-biology/rebase: ChangeLog rebase-1202.ebuild rebase-1106.ebuild rebase-1104.ebuild rebase-1103.ebuild

[gentoo-commits] gentoo-x86 commit in sci-biology/rebase: ChangeLog rebase-1202.ebuild rebase-1106.ebuild rebase-1104.ebuild rebase-1103.ebuild

[Justin Lecher (jlec)]

jlec        12/02/03 10:02:46

  Modified:             ChangeLog
  Added:                rebase-1202.ebuild
  Removed:              rebase-1106.ebuild rebase-1104.ebuild
                        rebase-1103.ebuild
  Log:
  Version Bump, cleaned old
  
  (Portage version: 2.2.0_alpha84/cvs/Linux x86_64)

Revision  Changes    Path
1.110                sci-biology/rebase/ChangeLog

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/ChangeLog?rev=1.110&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/ChangeLog?rev=1.110&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/ChangeLog?r1=1.109&r2=1.110

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v
retrieving revision 1.109
retrieving revision 1.110
diff -u -r1.109 -r1.110
--- ChangeLog	28 Nov 2011 11:43:41 -0000	1.109
+++ ChangeLog	3 Feb 2012 10:02:46 -0000	1.110
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/rebase
-# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.109 2011/11/28 11:43:41 phajdan.jr Exp $
+# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.110 2012/02/03 10:02:46 jlec Exp $
+
+*rebase-1202 (03 Feb 2012)
+
+  03 Feb 2012; Justin Lecher <jlec@gentoo.org> -rebase-1103.ebuild,
+  -rebase-1104.ebuild, -rebase-1106.ebuild, +rebase-1202.ebuild:
+  Version Bump, cleaned old
 
   28 Nov 2011; Pawel Hajdan jr <phajdan.jr@gentoo.org> rebase-1105.ebuild:
   x86 stable wrt bug #391615



1.1                  sci-biology/rebase/rebase-1202.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/rebase-1202.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/rebase-1202.ebuild?rev=1.1&content-type=text/plain

Index: rebase-1202.ebuild
===================================================================
# Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1202.ebuild,v 1.1 2012/02/03 10:02:46 jlec Exp $

EAPI="3"

MY_PV=${PV#1}

DESCRIPTION="A restriction enzyme database"
HOMEPAGE="http://rebase.neb.com"
SRC_URI="
	mirror://gentoo/${P}.tar.xz
	http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"

SLOT="0"
# Minimal build keeps only the indexed files (if applicable) and the
# documentation. The non-indexed database is not installed.
IUSE="emboss minimal"
LICENSE="public-domain"
KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"

RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
DEPEND="${RDEPEND}"

RESTRICT="binchecks strip"

src_compile() {
	if use emboss; then
		echo; einfo "Indexing Rebase for usage with EMBOSS."
		mkdir REBASE
		EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
				-protofile proto.${MY_PV} -equivalences \
				|| die "Indexing Rebase failed."
		echo
	fi
}

src_install() {
	if ! use minimal; then
		insinto /usr/share/${PN}
		doins withrefm.${MY_PV} proto.${MY_PV} || die \
				"Failed to install raw database."
	fi
	newdoc REBASE.DOC README || die "Failed to install documentation."
	if use emboss; then
		insinto /usr/share/EMBOSS/data/REBASE
		doins REBASE/embossre.{enz,ref,sup} || die \
				"Failed to install EMBOSS data files."
		insinto /usr/share/EMBOSS/data
		doins REBASE/embossre.equ \
				|| die "Failed to install enzyme prototypes file."
	fi
}