[gentoo-commits] gentoo-x86 commit in sys-cluster/openmpi: metadata.xml ChangeLog openmpi-1.5.4-r1.ebuild

[gentoo-commits] gentoo-x86 commit in sys-cluster/openmpi: metadata.xml ChangeLog openmpi-1.5.4-r1.ebuild

[Alexey Shvetsov (alexxy)]

alexxy      11/12/17 12:52:13

  Modified:             metadata.xml ChangeLog
  Added:                openmpi-1.5.4-r1.ebuild
  Log:
  Add some prefix related fixes for openmpi
  
  (Portage version: 2.2.0_alpha81/cvs/Linux x86_64)

Revision  Changes    Path
1.11                 sys-cluster/openmpi/metadata.xml

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sys-cluster/openmpi/metadata.xml?rev=1.11&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sys-cluster/openmpi/metadata.xml?rev=1.11&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sys-cluster/openmpi/metadata.xml?r1=1.10&r2=1.11

Index: metadata.xml
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sys-cluster/openmpi/metadata.xml,v
retrieving revision 1.10
retrieving revision 1.11
diff -u -r1.10 -r1.11
--- metadata.xml	3 Jul 2011 23:57:26 -0000	1.10
+++ metadata.xml	17 Dec 2011 12:52:12 -0000	1.11
@@ -11,6 +11,7 @@
 		<flag name='pbs'>Add support for the Portable Batch System (PBS)</flag>
 		<flag name='romio'>Build the ROMIO MPI-IO component</flag>
 		<flag name='mpi-threads'>Enable MPI_THREAD_MULTIPLE</flag>
+		<flag name='numa'>Enable numa memory allocation support</flag>
 		<flag name='sctp'>Enable SCTP support</flag>
 		<flag name='slurm'>Add support for SLURM</flag>
 		<flag name='vt'>Enable bundled VampirTrace support</flag>



1.93                 sys-cluster/openmpi/ChangeLog

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sys-cluster/openmpi/ChangeLog?rev=1.93&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sys-cluster/openmpi/ChangeLog?rev=1.93&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sys-cluster/openmpi/ChangeLog?r1=1.92&r2=1.93

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sys-cluster/openmpi/ChangeLog,v
retrieving revision 1.92
retrieving revision 1.93
diff -u -r1.92 -r1.93
--- ChangeLog	31 Aug 2011 17:26:17 -0000	1.92
+++ ChangeLog	17 Dec 2011 12:52:12 -0000	1.93
@@ -1,6 +1,11 @@
 # ChangeLog for sys-cluster/openmpi
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sys-cluster/openmpi/ChangeLog,v 1.92 2011/08/31 17:26:17 alexxy Exp $
+# $Header: /var/cvsroot/gentoo-x86/sys-cluster/openmpi/ChangeLog,v 1.93 2011/12/17 12:52:12 alexxy Exp $
+
+*openmpi-1.5.4-r1 (17 Dec 2011)
+
+  17 Dec 2011; Alexey Shvetsov <alexxy@gentoo.org> +openmpi-1.5.4-r1.ebuild:
+  Add some prefix related fixes
 
   31 Aug 2011; Alexey Shvetsov <alexxy@gentoo.org> +openmpi-1.5.4.ebuild:
   Version bump



1.1                  sys-cluster/openmpi/openmpi-1.5.4-r1.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sys-cluster/openmpi/openmpi-1.5.4-r1.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sys-cluster/openmpi/openmpi-1.5.4-r1.ebuild?rev=1.1&content-type=text/plain

Index: openmpi-1.5.4-r1.ebuild
===================================================================
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sys-cluster/openmpi/openmpi-1.5.4-r1.ebuild,v 1.1 2011/12/17 12:52:12 alexxy Exp $

EAPI=4
inherit eutils fortran-2 multilib flag-o-matic toolchain-funcs

MY_P=${P/-mpi}
S=${WORKDIR}/${MY_P}

DESCRIPTION="A high-performance message passing library (MPI)"
HOMEPAGE="http://www.open-mpi.org"
SRC_URI="http://www.open-mpi.org/software/ompi/v1.5/downloads/${MY_P}.tar.bz2"
LICENSE="BSD"
SLOT="0"
KEYWORDS="~alpha ~amd64 ~ia64 ~ppc ~ppc64 ~sparc ~x86 ~x86-fbsd ~amd64-linux"
IUSE="+cxx elibc_FreeBSD fortran heterogeneous infiniband ipv6 mpi-threads +numa pbs
	romio sctp slurm threads vt"

REQUIRED_USE="^^ (
					( !slurm !pbs )
					( slurm !pbs )
					( !slurm pbs )
				)"

RDEPEND="
	fortran? ( virtual/fortran )
	pbs? ( sys-cluster/torque )
	infiniband? ( sys-infiniband/openib )
	sctp? ( net-misc/lksctp-tools )
	vt? (
		!dev-libs/libotf
		!app-text/lcdf-typetools
	)
	elibc_FreeBSD? ( dev-libs/libexecinfo )
	numa? ( sys-process/numactl )
	>=sys-apps/hwloc-1.3
	!sys-cluster/mpich
	!sys-cluster/lam-mpi
	!sys-cluster/mpich2
	!sys-cluster/mpiexec"
DEPEND="${RDEPEND}"

pkg_setup() {
	use fortran && fortran-2_pkg_setup
	if use mpi-threads; then
		echo
		ewarn "WARNING: use of MPI_THREAD_MULTIPLE is still disabled by"
		ewarn "default and officially unsupported by upstream."
		ewarn "You may stop now and set USE=-mpi-threads"
		echo
	fi

	echo
	elog "OpenMPI has an overwhelming count of configuration options."
	elog "Don't forget the EXTRA_ECONF environment variable can let you"
	elog "specify configure options if you find them necessary."
	echo
}

src_prepare() {
	# Necessary for scalibility, see
	# http://www.open-mpi.org/community/lists/users/2008/09/6514.php
	if use threads; then
		echo 'oob_tcp_listen_mode = listen_thread' \
			>> opal/etc/openmpi-mca-params.conf
	fi

	epatch "${FILESDIR}"/openmpi-r24328.patch
}

src_configure() {
	local myconf=(
		--sysconfdir="${EPREFIX}/etc/${PN}"
		--enable-pretty-print-stacktrace
		--enable-orterun-prefix-by-default
		--with-hwloc="${EPREFIX}/usr"
		)

	if use mpi-threads; then
		myconf+=(
			--enable-mpi-thread-multiple
			--enable-opal-multi-threads
			)
	fi

	if use fortran; then
		if [[ $(tc-getFC) =~ g77 ]]; then
			myconf+=(--disable-mpi-f90)
		elif [[ $(tc-getFC) =~ if ]]; then
			# Enabled here as gfortran compile times are huge with this enabled.
			myconf+=( --with-mpi-f90-size=medium )
		fi
	else
		myconf+=( --disable-mpi-f90 --disable-mpi-f77 )
	fi

	! use vt && myconf+=(--enable-contrib-no-build=vt)

	use infiniband && myconf+=( --with-openib="${EPREFIX}/usr"  )
	use numa && myconf+=( --with-libnuma="${EPREFIX}/usr" )

	econf "${myconf[@]}" \
		$(use_enable cxx mpi-cxx) \
		$(use_enable romio io-romio) \
		$(use_enable heterogeneous) \
		$(use_with pbs tm) \
		$(use_with slurm) \
		$(use_enable ipv6) \
		$(use_with sctp sctp)
}

src_install () {
	emake DESTDIR="${D}" install || die "make install failed"
	# From USE=vt see #359917
	rm "${D}"/usr/share/libtool &> /dev/null
	dodoc README AUTHORS NEWS VERSION || die
}

src_test() {
	# Doesn't work with the default src_test as the dry run (-n) fails.
	emake -j1 check || die "emake check failed"
}