* [gentoo-commits] gentoo-x86 commit in sci-chemistry/arp-warp-bin: arp-warp-bin-7.1.ebuild ChangeLog arp-warp-bin-7.1-r1.ebuild
@ 2011-11-26 11:00 Justin Lecher (jlec)
0 siblings, 0 replies; 2+ messages in thread
From: Justin Lecher (jlec) @ 2011-11-26 11:00 UTC (permalink / raw
To: gentoo-commits
jlec 11/11/26 11:00:18
Modified: arp-warp-bin-7.1.ebuild ChangeLog
Added: arp-warp-bin-7.1-r1.ebuild
Log:
Drop exit from source script; If present in the script, but package files are not present, you cannot log in anymore.
(Portage version: 2.2.0_alpha77/cvs/Linux x86_64, RepoMan options: --force)
Revision Changes Path
1.13 sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild?rev=1.13&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild?rev=1.13&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild?r1=1.12&r2=1.13
Index: arp-warp-bin-7.1.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild,v
retrieving revision 1.12
retrieving revision 1.13
diff -u -r1.12 -r1.13
--- arp-warp-bin-7.1.ebuild 16 Oct 2011 12:24:10 -0000 1.12
+++ arp-warp-bin-7.1.ebuild 26 Nov 2011 11:00:18 -0000 1.13
@@ -1,6 +1,6 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild,v 1.12 2011/10/16 12:24:10 ssuominen Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild,v 1.13 2011/11/26 11:00:18 jlec Exp $
EAPI=3
@@ -82,7 +82,7 @@
ewarn " 3/2=" $testcommand
ewarn "Invalid decimal separator (must be ".")"
ewarn "You need to set this correctly!!!"
- ewarn
+ echo
ewarn "One way of setting the decimal separator is:"
ewarn "setenv LC_NUMERIC C' in your .cshrc file"
ewarn "\tor"
@@ -91,7 +91,7 @@
fi
grep -q sse2 /proc/cpuinfo || einfo "The CPU is lacking SSE2! You should use the cluster at EMBL-Hamburg."
- einfo
+ echo
}
pkg_postrm() {
1.16 sci-chemistry/arp-warp-bin/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/ChangeLog?rev=1.16&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/ChangeLog?rev=1.16&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/ChangeLog?r1=1.15&r2=1.16
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/ChangeLog,v
retrieving revision 1.15
retrieving revision 1.16
diff -u -r1.15 -r1.16
--- ChangeLog 16 Oct 2011 12:24:10 -0000 1.15
+++ ChangeLog 26 Nov 2011 11:00:18 -0000 1.16
@@ -1,6 +1,13 @@
# ChangeLog for sci-chemistry/arp-warp-bin
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/ChangeLog,v 1.15 2011/10/16 12:24:10 ssuominen Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/ChangeLog,v 1.16 2011/11/26 11:00:18 jlec Exp $
+
+*arp-warp-bin-7.1-r1 (26 Nov 2011)
+
+ 26 Nov 2011; Justin Lecher <jlec@gentoo.org> arp-warp-bin-7.1.ebuild,
+ +arp-warp-bin-7.1-r1.ebuild:
+ Drop exit from source script; If present in the script, but package files are
+ not present, you cannot log in anymore.
16 Oct 2011; Samuli Suominen <ssuominen@gentoo.org> arp-warp-bin-7.1.ebuild:
amd64 restable
1.1 sci-chemistry/arp-warp-bin/arp-warp-bin-7.1-r1.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1-r1.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1-r1.ebuild?rev=1.1&content-type=text/plain
Index: arp-warp-bin-7.1-r1.ebuild
===================================================================
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1-r1.ebuild,v 1.1 2011/11/26 11:00:18 jlec Exp $
EAPI=3
PYTHON_DEPEND="2"
inherit eutils prefix python
MY_P="arp_warp_${PV}"
DESCRIPTION="Software for improvement and interpretation of crystallographic electron density maps"
SRC_URI="${MY_P}.tar.gz"
HOMEPAGE="http://www.embl-hamburg.de/ARP/"
LICENSE="ArpWarp"
SLOT="0"
KEYWORDS="-* amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE=""
RDEPEND="
app-shells/tcsh
>=sci-chemistry/ccp4-6.1.3
sys-apps/gawk
virtual/jre
virtual/opengl
x11-libs/libX11"
DEPEND=""
RESTRICT="fetch"
S="${WORKDIR}/${MY_P}"
pkg_nofetch(){
elog "Fill out the form at http://www.embl-hamburg.de/ARP/"
elog "and place ${A} in ${DISTDIR}"
}
pkg_setup() {
python_set_active_version 2
}
src_prepare() {
epatch "${FILESDIR}"/${PV}-setup.patch
eprefixify "${S}"/share/arpwarp_setup_base.*
sed "s:PYVER:$(python_get_version):g" -i "${S}"/share/arpwarp_setup_base.*
python_convert_shebangs $(python_get_version) flex-wARP-src-354/*py
sed -e "s:/usr/:${EPREFIX}/usr/:g" -i flex-wARP-src-354/*py || die
sed -e '/exit/d' -i "${S}"/share/arpwarp_setup_base.* || die
}
src_install(){
PYVER=$(python_get_version)
m_type=$(uname -m)
os_type=$(uname)
insinto /opt/${PN}/byte-code/python-${PYVER}
doins "${S}"/flex-wARP-src-354/*py || die
exeinto /opt/${PN}/bin/bin-${m_type}-${os_type}
doexe "${S}"/bin/bin-${m_type}-${os_type}/* && \
doexe "${S}"/share/*sh || die
insinto /opt/${PN}/bin/bin-${m_type}-${os_type}
doins "${S}"/share/*{gif,bmp,XYZ,bash,csh,dat,lib,tbl,llh} || die
insinto /etc/profile.d/
newins "${S}"/share/arpwarp_setup_base.csh 90arpwarp_setup.csh && \
newins "${S}"/share/arpwarp_setup_base.bash 90arpwarp_setup.sh || die
dodoc "${S}"/README manual/UserGuide${PV}.pdf || die
dohtml -r "${S}"/manual/html/* || die
}
pkg_postinst(){
python_need_rebuild
python_mod_optimize /opt/${PN}/byte-code/python-${PYVER}
testcommand=$(echo 3 2 | awk '{printf"%3.1f",$1/$2}')
if [ $testcommand == "1,5" ];then
ewarn "*** ERROR ***"
ewarn " 3/2=" $testcommand
ewarn "Invalid decimal separator (must be ".")"
ewarn "You need to set this correctly!!!"
echo
ewarn "One way of setting the decimal separator is:"
ewarn "setenv LC_NUMERIC C' in your .cshrc file"
ewarn "\tor"
ewarn "export LC_NUMERIC=C' in your .bashrc file"
ewarn "Otherwise please consult your system manager"
fi
grep -q sse2 /proc/cpuinfo || einfo "The CPU is lacking SSE2! You should use the cluster at EMBL-Hamburg."
echo
}
pkg_postrm() {
python_mod_cleanup /opt/${PN}/byte-code/python-${PYVER}
}
^ permalink raw reply [flat|nested] 2+ messages in thread
* [gentoo-commits] gentoo-x86 commit in sci-chemistry/arp-warp-bin: arp-warp-bin-7.1.ebuild ChangeLog arp-warp-bin-7.1-r1.ebuild
@ 2011-12-24 9:01 Justin Lecher (jlec)
0 siblings, 0 replies; 2+ messages in thread
From: Justin Lecher (jlec) @ 2011-12-24 9:01 UTC (permalink / raw
To: gentoo-commits
jlec 11/12/24 09:01:25
Modified: arp-warp-bin-7.1.ebuild ChangeLog
arp-warp-bin-7.1-r1.ebuild
Log:
Correct dep from sci-chemistry/ccp4 to sci-chemistry/refmac
(Portage version: 2.2.0_alpha82/cvs/Linux x86_64)
Revision Changes Path
1.14 sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild?rev=1.14&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild?rev=1.14&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild?r1=1.13&r2=1.14
Index: arp-warp-bin-7.1.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild,v
retrieving revision 1.13
retrieving revision 1.14
diff -u -r1.13 -r1.14
--- arp-warp-bin-7.1.ebuild 26 Nov 2011 11:00:18 -0000 1.13
+++ arp-warp-bin-7.1.ebuild 24 Dec 2011 09:01:24 -0000 1.14
@@ -1,6 +1,6 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild,v 1.13 2011/11/26 11:00:18 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild,v 1.14 2011/12/24 09:01:24 jlec Exp $
EAPI=3
@@ -21,7 +21,7 @@
RDEPEND="
app-shells/tcsh
- >=sci-chemistry/ccp4-6.1.3
+ sci-chemistry/refmac
sys-apps/gawk
virtual/jre
virtual/opengl
1.17 sci-chemistry/arp-warp-bin/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/ChangeLog?rev=1.17&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/ChangeLog?rev=1.17&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/ChangeLog?r1=1.16&r2=1.17
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/ChangeLog,v
retrieving revision 1.16
retrieving revision 1.17
diff -u -r1.16 -r1.17
--- ChangeLog 26 Nov 2011 11:00:18 -0000 1.16
+++ ChangeLog 24 Dec 2011 09:01:24 -0000 1.17
@@ -1,6 +1,10 @@
# ChangeLog for sci-chemistry/arp-warp-bin
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/ChangeLog,v 1.16 2011/11/26 11:00:18 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/ChangeLog,v 1.17 2011/12/24 09:01:24 jlec Exp $
+
+ 24 Dec 2011; Justin Lecher <jlec@gentoo.org> arp-warp-bin-7.1.ebuild,
+ arp-warp-bin-7.1-r1.ebuild:
+ Correct dep from sci-chemistry/ccp4 to sci-chemistry/refmac
*arp-warp-bin-7.1-r1 (26 Nov 2011)
1.2 sci-chemistry/arp-warp-bin/arp-warp-bin-7.1-r1.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1-r1.ebuild?rev=1.2&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1-r1.ebuild?rev=1.2&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1-r1.ebuild?r1=1.1&r2=1.2
Index: arp-warp-bin-7.1-r1.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1-r1.ebuild,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- arp-warp-bin-7.1-r1.ebuild 26 Nov 2011 11:00:18 -0000 1.1
+++ arp-warp-bin-7.1-r1.ebuild 24 Dec 2011 09:01:25 -0000 1.2
@@ -1,6 +1,6 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1-r1.ebuild,v 1.1 2011/11/26 11:00:18 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1-r1.ebuild,v 1.2 2011/12/24 09:01:25 jlec Exp $
EAPI=3
@@ -21,7 +21,7 @@
RDEPEND="
app-shells/tcsh
- >=sci-chemistry/ccp4-6.1.3
+ sci-chemistry/refmac
sys-apps/gawk
virtual/jre
virtual/opengl
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