* [gentoo-commits] gentoo-x86 commit in sci-chemistry/pdb-extract: pdb-extract-3.004-r2.ebuild metadata.xml ChangeLog pdb-extract-1.700.ebuild pdb-extract-3.004-r1.ebuild
@ 2011-07-21 19:04 Justin Lecher (jlec)
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From: Justin Lecher (jlec) @ 2011-07-21 19:04 UTC (permalink / raw
To: gentoo-commits
jlec 11/07/21 19:04:04
Modified: pdb-extract-3.004-r2.ebuild metadata.xml ChangeLog
pdb-extract-1.700.ebuild
pdb-extract-3.004-r1.ebuild
Log:
Some cleanup
(Portage version: 2.2.0_alpha46/cvs/Linux x86_64)
Revision Changes Path
1.2 sci-chemistry/pdb-extract/pdb-extract-3.004-r2.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r2.ebuild?rev=1.2&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r2.ebuild?rev=1.2&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r2.ebuild?r1=1.1&r2=1.2
Index: pdb-extract-3.004-r2.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r2.ebuild,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- pdb-extract-3.004-r2.ebuild 15 Jun 2010 14:45:45 -0000 1.1
+++ pdb-extract-3.004-r2.ebuild 21 Jul 2011 19:04:04 -0000 1.2
@@ -1,8 +1,8 @@
-# Copyright 1999-2010 Gentoo Foundation
+# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r2.ebuild,v 1.1 2010/06/15 14:45:45 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r2.ebuild,v 1.2 2011/07/21 19:04:04 jlec Exp $
-EAPI="3"
+EAPI=3
inherit eutils toolchain-funcs multilib prefix
@@ -24,10 +24,11 @@
S="${WORKDIR}/${MY_P}"
src_prepare() {
- epatch "${FILESDIR}"/${P}-cflags-install.patch
- epatch "${FILESDIR}"/${P}-gcc-4.3.patch
- epatch "${FILESDIR}"/${P}-Makefile.patch
- epatch "${FILESDIR}"/${P}-env.patch
+ epatch \
+ "${FILESDIR}"/${P}-cflags-install.patch \
+ "${FILESDIR}"/${P}-gcc-4.3.patch \
+ "${FILESDIR}"/${P}-Makefile.patch \
+ "${FILESDIR}"/${P}-env.patch
sed -i "s:GENTOOLIBDIR:$(get_libdir):g" \
pdb-extract-v3.0/Makefile \
1.5 sci-chemistry/pdb-extract/metadata.xml
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pdb-extract/metadata.xml?rev=1.5&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pdb-extract/metadata.xml?rev=1.5&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pdb-extract/metadata.xml?r1=1.4&r2=1.5
Index: metadata.xml
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/metadata.xml,v
retrieving revision 1.4
retrieving revision 1.5
diff -u -r1.4 -r1.5
--- metadata.xml 20 Sep 2006 05:09:00 -0000 1.4
+++ metadata.xml 21 Jul 2011 19:04:04 -0000 1.5
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<herd>sci-chemistry</herd>
+ <herd>sci-chemistry</herd>
</pkgmetadata>
1.17 sci-chemistry/pdb-extract/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog?rev=1.17&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog?rev=1.17&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog?r1=1.16&r2=1.17
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog,v
retrieving revision 1.16
retrieving revision 1.17
diff -u -r1.16 -r1.17
--- ChangeLog 15 Jun 2010 14:45:45 -0000 1.16
+++ ChangeLog 21 Jul 2011 19:04:04 -0000 1.17
@@ -1,6 +1,10 @@
# ChangeLog for sci-chemistry/pdb-extract
-# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog,v 1.16 2010/06/15 14:45:45 jlec Exp $
+# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog,v 1.17 2011/07/21 19:04:04 jlec Exp $
+
+ 21 Jul 2011; Justin Lecher <jlec@gentoo.org> pdb-extract-1.700.ebuild,
+ pdb-extract-3.004-r1.ebuild, pdb-extract-3.004-r2.ebuild, metadata.xml:
+ Some cleanup
*pdb-extract-3.004-r2 (15 Jun 2010)
1.7 sci-chemistry/pdb-extract/pdb-extract-1.700.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-1.700.ebuild?rev=1.7&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-1.700.ebuild?rev=1.7&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-1.700.ebuild?r1=1.6&r2=1.7
Index: pdb-extract-1.700.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-1.700.ebuild,v
retrieving revision 1.6
retrieving revision 1.7
diff -u -r1.6 -r1.7
--- pdb-extract-1.700.ebuild 2 Jul 2008 01:39:27 -0000 1.6
+++ pdb-extract-1.700.ebuild 21 Jul 2011 19:04:04 -0000 1.7
@@ -1,21 +1,25 @@
-# Copyright 1999-2008 Gentoo Foundation
+# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-1.700.ebuild,v 1.6 2008/07/02 01:39:27 dberkholz Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-1.700.ebuild,v 1.7 2011/07/21 19:04:04 jlec Exp $
inherit eutils toolchain-funcs multilib
MY_P="${PN}-v${PV}-prod-src"
+
DESCRIPTION="Tools for extracting mmCIF data from structure determination applications"
HOMEPAGE="http://sw-tools.pdb.org/apps/PDB_EXTRACT/index.html"
SRC_URI="http://sw-tools.pdb.org/apps/PDB_EXTRACT/${MY_P}.tar.gz"
+
LICENSE="PDB"
SLOT="0"
KEYWORDS="~amd64 ppc x86"
IUSE=""
+
RDEPEND=""
DEPEND="${RDEPEND}
sci-libs/cifparse-obj"
PDEPEND="sci-libs/rcsb-data"
+
S="${WORKDIR}/${MY_P}"
src_unpack() {
1.2 sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild?rev=1.2&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild?rev=1.2&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild?r1=1.1&r2=1.2
Index: pdb-extract-3.004-r1.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- pdb-extract-3.004-r1.ebuild 25 Apr 2010 09:53:47 -0000 1.1
+++ pdb-extract-3.004-r1.ebuild 21 Jul 2011 19:04:04 -0000 1.2
@@ -1,8 +1,8 @@
-# Copyright 1999-2010 Gentoo Foundation
+# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild,v 1.1 2010/04/25 09:53:47 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/pdb-extract-3.004-r1.ebuild,v 1.2 2011/07/21 19:04:04 jlec Exp $
-EAPI="3"
+EAPI=3
inherit eutils toolchain-funcs multilib prefix
@@ -24,10 +24,11 @@
S="${WORKDIR}/${MY_P}"
src_prepare() {
- epatch "${FILESDIR}"/${P}-cflags-install.patch
- epatch "${FILESDIR}"/${P}-gcc-4.3.patch
- epatch "${FILESDIR}"/${P}-Makefile.patch
- epatch "${FILESDIR}"/${P}-env.patch
+ epatch \
+ "${FILESDIR}"/${P}-cflags-install.patch \
+ "${FILESDIR}"/${P}-gcc-4.3.patch \
+ "${FILESDIR}"/${P}-Makefile.patch \
+ "${FILESDIR}"/${P}-env.patch
sed -i "s:GENTOOLIBDIR:$(get_libdir):g" \
pdb-extract-v3.0/Makefile \
@@ -50,10 +51,6 @@
eprefixify pdb-extract-v3.0/Makefile etc/*
}
-src_compile() {
- emake || die "make failed"
-}
-
src_install() {
dobin bin/pdb_extract{,_sf} \
|| die "failed to install binaries"
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2011-07-21 19:04 [gentoo-commits] gentoo-x86 commit in sci-chemistry/pdb-extract: pdb-extract-3.004-r2.ebuild metadata.xml ChangeLog pdb-extract-1.700.ebuild pdb-extract-3.004-r1.ebuild Justin Lecher (jlec)
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