* [gentoo-commits] gentoo-x86 commit in sci-chemistry/apbs: apbs-1.3-r1.ebuild metadata.xml ChangeLog apbs-1.2.1b-r4.ebuild apbs-1.3.ebuild
@ 2011-07-02 8:56 Justin Lecher (jlec)
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From: Justin Lecher (jlec) @ 2011-07-02 8:56 UTC (permalink / raw
To: gentoo-commits
jlec 11/07/02 08:56:56
Modified: apbs-1.3-r1.ebuild metadata.xml ChangeLog
apbs-1.2.1b-r4.ebuild apbs-1.3.ebuild
Log:
Use pkg-config to detect mmdb and lapack libs
(Portage version: 2.2.0_alpha43/cvs/Linux x86_64)
Revision Changes Path
1.6 sci-chemistry/apbs/apbs-1.3-r1.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.3-r1.ebuild?rev=1.6&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.3-r1.ebuild?rev=1.6&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.3-r1.ebuild?r1=1.5&r2=1.6
Index: apbs-1.3-r1.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.3-r1.ebuild,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -r1.5 -r1.6
--- apbs-1.3-r1.ebuild 21 Jun 2011 16:07:35 -0000 1.5
+++ apbs-1.3-r1.ebuild 2 Jul 2011 08:56:56 -0000 1.6
@@ -1,12 +1,12 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.3-r1.ebuild,v 1.5 2011/06/21 16:07:35 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.3-r1.ebuild,v 1.6 2011/07/02 08:56:56 jlec Exp $
EAPI="3"
PYTHON_DEPEND="python? 2"
-inherit autotools eutils fortran-2 flag-o-matic python toolchain-funcs versionator
+inherit autotools eutils flag-o-matic fortran-2 python toolchain-funcs versionator
MY_PV=$(get_version_component_range 1-3)
MY_P="${PN}-${MY_PV}"
@@ -108,7 +108,7 @@
econf \
--disable-maloc-rebuild \
--enable-shared \
- --with-blas=-lblas \
+ --with-blas="$(pkg-config --libs blas)" \
$(use_enable openmp) \
$(use_enable python) \
$(use_enable tools) \
1.11 sci-chemistry/apbs/metadata.xml
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/metadata.xml?rev=1.11&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/metadata.xml?rev=1.11&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/metadata.xml?r1=1.10&r2=1.11
Index: metadata.xml
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/metadata.xml,v
retrieving revision 1.10
retrieving revision 1.11
diff -u -r1.10 -r1.11
--- metadata.xml 1 Nov 2010 17:25:22 -0000 1.10
+++ metadata.xml 2 Jul 2011 08:56:56 -0000 1.11
@@ -2,21 +2,21 @@
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<herd>sci-chemistry</herd>
- <maintainer>
- <email>markusle@gentoo.org</email>
- <name>Markus Dittrich</name>
- </maintainer>
+ <maintainer>
+ <email>markusle@gentoo.org</email>
+ <name>Markus Dittrich</name>
+ </maintainer>
<maintainer>
<email>jlec@gentoo.org</email>
<name>Justin Lecher</name>
<description>Ebuild Crasher</description>
- </maintainer>
+ </maintainer>
<use>
- <flag name='arpack'>Include support for arpack libs</flag>
- <flag name='fetk'>Include support for FeTK</flag>
- <flag name='tools'>Install optional tools</flag>
+ <flag name="arpack">Include support for arpack libs</flag>
+ <flag name="fetk">Include support for FeTK</flag>
+ <flag name="tools">Install optional tools</flag>
</use>
-<longdescription>
+ <longdescription>
APBS is a software package for modeling biomolecular solvation through solution
of the Poisson-Boltzmann equation (PBE), one of the most popular continuum
models for describing electrostatic interactions between molecular solutes in
1.49 sci-chemistry/apbs/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/ChangeLog?rev=1.49&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/ChangeLog?rev=1.49&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/ChangeLog?r1=1.48&r2=1.49
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v
retrieving revision 1.48
retrieving revision 1.49
diff -u -r1.48 -r1.49
--- ChangeLog 21 Jun 2011 16:07:35 -0000 1.48
+++ ChangeLog 2 Jul 2011 08:56:56 -0000 1.49
@@ -1,6 +1,10 @@
# ChangeLog for sci-chemistry/apbs
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.48 2011/06/21 16:07:35 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.49 2011/07/02 08:56:56 jlec Exp $
+
+ 02 Jul 2011; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r4.ebuild,
+ apbs-1.3.ebuild, apbs-1.3-r1.ebuild, metadata.xml:
+ Use pkg-config to detect mmdb and lapack libs
21 Jun 2011; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r4.ebuild,
apbs-1.3.ebuild, apbs-1.3-r1.ebuild:
1.12 sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild?rev=1.12&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild?rev=1.12&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild?r1=1.11&r2=1.12
Index: apbs-1.2.1b-r4.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild,v
retrieving revision 1.11
retrieving revision 1.12
diff -u -r1.11 -r1.12
--- apbs-1.2.1b-r4.ebuild 21 Jun 2011 16:07:35 -0000 1.11
+++ apbs-1.2.1b-r4.ebuild 2 Jul 2011 08:56:56 -0000 1.12
@@ -1,12 +1,12 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild,v 1.11 2011/06/21 16:07:35 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild,v 1.12 2011/07/02 08:56:56 jlec Exp $
EAPI="3"
PYTHON_DEPEND="python? 2"
-inherit autotools eutils fortran-2 flag-o-matic python toolchain-funcs versionator
+inherit autotools eutils flag-o-matic fortran-2 python toolchain-funcs versionator
MY_PV=$(get_version_component_range 1-3)
MY_P="${PN}-${MY_PV}"
@@ -80,7 +80,7 @@
econf \
--disable-maloc-rebuild \
--enable-shared \
- --with-blas=-lblas \
+ --with-blas="$(pkg-config --libs blas)" \
$(use_enable openmp) \
$(use_enable python) \
$(use_enable tools) \
1.8 sci-chemistry/apbs/apbs-1.3.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.3.ebuild?rev=1.8&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.3.ebuild?rev=1.8&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.3.ebuild?r1=1.7&r2=1.8
Index: apbs-1.3.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.3.ebuild,v
retrieving revision 1.7
retrieving revision 1.8
diff -u -r1.7 -r1.8
--- apbs-1.3.ebuild 21 Jun 2011 16:07:35 -0000 1.7
+++ apbs-1.3.ebuild 2 Jul 2011 08:56:56 -0000 1.8
@@ -1,12 +1,12 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.3.ebuild,v 1.7 2011/06/21 16:07:35 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.3.ebuild,v 1.8 2011/07/02 08:56:56 jlec Exp $
EAPI="3"
PYTHON_DEPEND="python? 2"
-inherit autotools eutils fortran-2 flag-o-matic python toolchain-funcs versionator
+inherit autotools eutils flag-o-matic fortran-2 python toolchain-funcs versionator
MY_PV=$(get_version_component_range 1-3)
MY_P="${PN}-${MY_PV}"
@@ -105,7 +105,7 @@
econf \
--disable-maloc-rebuild \
--enable-shared \
- --with-blas=-lblas \
+ --with-blas="$(pkg-config --libs blas)" \
$(use_enable openmp) \
$(use_enable python) \
$(use_enable tools) \
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2011-07-02 8:56 [gentoo-commits] gentoo-x86 commit in sci-chemistry/apbs: apbs-1.3-r1.ebuild metadata.xml ChangeLog apbs-1.2.1b-r4.ebuild apbs-1.3.ebuild Justin Lecher (jlec)
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