From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from smtp.gentoo.org (woodpecker.gentoo.org [140.211.166.183]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 7FE511581EE for ; Thu, 03 Apr 2025 18:02:26 +0000 (UTC) Received: from lists.gentoo.org (bobolink.gentoo.org [140.211.166.189]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits)) (No client certificate requested) (Authenticated sender: relay-lists.gentoo.org@gentoo.org) by smtp.gentoo.org (Postfix) with ESMTPSA id 654813432CD for ; Thu, 03 Apr 2025 18:02:26 +0000 (UTC) Received: from bobolink.gentoo.org (localhost [127.0.0.1]) by bobolink.gentoo.org (Postfix) with ESMTP id 676BE1104B4; Thu, 03 Apr 2025 18:02:25 +0000 (UTC) Received: from smtp.gentoo.org (dev.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits)) (No client certificate requested) by bobolink.gentoo.org (Postfix) with ESMTPS id 57D9311042D for ; Thu, 03 Apr 2025 18:02:25 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id DE4BE343281 for ; Thu, 03 Apr 2025 18:02:24 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 36D5A1936 for ; Thu, 03 Apr 2025 18:02:23 +0000 (UTC) From: "Alexey Shvetsov" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Alexey Shvetsov" Message-ID: <1743703334.1052e61ab92a131010990d2bf8e32284e2c055b1.alexxy@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: sci-biology/biopython/ X-VCS-Repository: repo/gentoo X-VCS-Files: sci-biology/biopython/Manifest sci-biology/biopython/biopython-1.81-r1.ebuild sci-biology/biopython/biopython-1.85.ebuild X-VCS-Directories: sci-biology/biopython/ X-VCS-Committer: alexxy X-VCS-Committer-Name: Alexey Shvetsov X-VCS-Revision: 1052e61ab92a131010990d2bf8e32284e2c055b1 X-VCS-Branch: master Date: Thu, 03 Apr 2025 18:02:23 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 0305ea18-4d3d-4b17-8109-0c798cd6aee9 X-Archives-Hash: 026b7bdcd52f9944bbbea714df6d6cd6 commit: 1052e61ab92a131010990d2bf8e32284e2c055b1 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Apr 3 17:48:10 2025 +0000 Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Apr 3 18:02:14 2025 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1052e61a sci-biology/biopython: add 1.85, drop 1.81-r1 Closes: https://bugs.gentoo.org/952648 Signed-off-by: Alexey Shvetsov gentoo.org> sci-biology/biopython/Manifest | 2 +- .../{biopython-1.81-r1.ebuild => biopython-1.85.ebuild} | 9 ++------- 2 files changed, 3 insertions(+), 8 deletions(-) diff --git a/sci-biology/biopython/Manifest b/sci-biology/biopython/Manifest index 0c16022dea2c..65d71b60fb69 100644 --- a/sci-biology/biopython/Manifest +++ b/sci-biology/biopython/Manifest @@ -1 +1 @@ -DIST biopython-1.81.tar.gz 19324875 BLAKE2B be3a85f5b60638987d6186af498411b494f8d27389f24cd1b9e658bc6b1a29c799ec8b20a9ac0b955c6d4c239706f4dbb5b75f6d56908f63d731b1d56c9fd587 SHA512 1595fad6631bfb6cf4e1a92ed72e6093e2a0c24f3c0bd4182267ec9742fb03dff16099eedde139598aa6b5b8380bbac9e48246cb9ab8b44109333d60adfd00ed +DIST biopython-1.85.tar.gz 19909902 BLAKE2B 796b3989ddda5d6e01952b790e3591f9d32b006348210e09e6be8a9a34f9fa81731325d9c0a022a6ff95da0349991d1e1e4c6ae6c1411db3ca10ef61f97bc713 SHA512 a9bff4fdf34f71f74f35a9bbf25887d6fcf84622d77854e11b0da418b6ff88c7d6e49474d82ca2e4da782ea07cc28f03b43b219b798a806ab02e11af21cd9dab diff --git a/sci-biology/biopython/biopython-1.81-r1.ebuild b/sci-biology/biopython/biopython-1.85.ebuild similarity index 90% rename from sci-biology/biopython/biopython-1.81-r1.ebuild rename to sci-biology/biopython/biopython-1.85.ebuild index 96d83b74b492..99eb4782d5fc 100644 --- a/sci-biology/biopython/biopython-1.81-r1.ebuild +++ b/sci-biology/biopython/biopython-1.85.ebuild @@ -1,9 +1,9 @@ -# Copyright 1999-2024 Gentoo Authors +# Copyright 1999-2025 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=8 -PYTHON_COMPAT=( python3_{10..12} ) +PYTHON_COMPAT=( python3_{11..13} ) DISTUTILS_USE_PEP517="setuptools" DISTUTILS_EXT=1 @@ -29,11 +29,6 @@ BDEPEND="app-alternatives/lex" DOCS=( {CONTRIB,DEPRECATED,NEWS,README}.rst Doc/. ) -PATCHES=( - "${FILESDIR}/${P}-reportlab4.patch" - "${FILESDIR}/${P}-python3.12.patch" -) - python_test() { cd Tests || die "${EPYTHON}" run_tests.py --offline --verbose || die