[gentoo-commits] proj/sci:master commit in: dev-python/pybedtools/

[gentoo-commits] proj/sci:master commit in: dev-python/pybedtools/

[Nowa Ammerlaan]

commit:     1e2e5e5c5128af6c57924c4785746b90b77882f4
Author:     Michael Schubert <mschu.dev <AT> gmail <DOT> com>
AuthorDate: Sun Jan 26 12:40:24 2025 +0000
Commit:     Nowa Ammerlaan <nowa <AT> gentoo <DOT> org>
CommitDate: Fri Jan 31 12:58:26 2025 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=1e2e5e5c

dev-python/pybedtools: version bump 0.11.0 and disable lto

Signed-off-by: Michael Schubert <mschu.dev <AT> gmail.com>
Closes: https://github.com/gentoo/sci/pull/1316
Signed-off-by: Nowa Ammerlaan <nowa <AT> gentoo.org>

 .../{pybedtools-0.10.0.ebuild => pybedtools-0.11.0.ebuild}       | 9 +++++++--
 1 file changed, 7 insertions(+), 2 deletions(-)

diff --git a/dev-python/pybedtools/pybedtools-0.10.0.ebuild b/dev-python/pybedtools/pybedtools-0.11.0.ebuild
similarity index 87%
rename from dev-python/pybedtools/pybedtools-0.10.0.ebuild
rename to dev-python/pybedtools/pybedtools-0.11.0.ebuild
index ae51c24ce..70012c4eb 100644
--- a/dev-python/pybedtools/pybedtools-0.10.0.ebuild
+++ b/dev-python/pybedtools/pybedtools-0.11.0.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2024 Gentoo Authors
+# Copyright 1999-2025 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=8
@@ -6,7 +6,7 @@ EAPI=8
 PYTHON_COMPAT=( python3_{10..12} )
 DISTUTILS_USE_PEP517=setuptools
 DISTUTILS_EXT=1
-inherit distutils-r1
+inherit distutils-r1 flag-o-matic
 
 DESCRIPTION="Use BED and GFF files from python using BEDtools"
 HOMEPAGE="https://daler.github.io/pybedtools"
@@ -31,6 +31,11 @@ RDEPEND="
 #distutils_enable_sphinx docs/source
 distutils_enable_tests pytest
 
+python_compile() {
+	filter-lto
+	distutils-r1_python_compile
+}
+
 python_test() {
 	# Requires network
 	local EPYTEST_DESELECT=(

[gentoo-commits] proj/sci:master commit in: dev-python/pybedtools/

[Nowa Ammerlaan]

commit:     d0e7d951c2473ecab85ed1421e5a8de0fa947f8a
Author:     Michael Schubert <mschu.dev <AT> gmail <DOT> com>
AuthorDate: Tue Mar 18 21:58:42 2025 +0000
Commit:     Nowa Ammerlaan <nowa <AT> gentoo <DOT> org>
CommitDate: Fri Mar 21 15:03:37 2025 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=d0e7d951

dev-python/pybedtools: version bump 0.12.0

Signed-off-by: Michael Schubert <mschu.dev <AT> gmail.com>
Closes: https://github.com/gentoo/sci/pull/1337
Signed-off-by: Nowa Ammerlaan <nowa <AT> gentoo.org>

 .../pybedtools/{pybedtools-0.11.0.ebuild => pybedtools-0.12.0.ebuild}     | 0
 1 file changed, 0 insertions(+), 0 deletions(-)

diff --git a/dev-python/pybedtools/pybedtools-0.11.0.ebuild b/dev-python/pybedtools/pybedtools-0.12.0.ebuild
similarity index 100%
rename from dev-python/pybedtools/pybedtools-0.11.0.ebuild
rename to dev-python/pybedtools/pybedtools-0.12.0.ebuild

[gentoo-commits] proj/sci:master commit in: dev-python/pybedtools/

[Nowa Ammerlaan]

commit:     438a2aa89bbd25b82527eaa13e74918f0b68c8c1
Author:     Nowa Ammerlaan <nowa <AT> gentoo <DOT> org>
AuthorDate: Fri Mar 21 15:04:05 2025 +0000
Commit:     Nowa Ammerlaan <nowa <AT> gentoo <DOT> org>
CommitDate: Fri Mar 21 15:04:05 2025 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=438a2aa8

dev-python/pybedtools: enable py3.13

Signed-off-by: Nowa Ammerlaan <nowa <AT> gentoo.org>

 dev-python/pybedtools/pybedtools-0.12.0.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/dev-python/pybedtools/pybedtools-0.12.0.ebuild b/dev-python/pybedtools/pybedtools-0.12.0.ebuild
index 70012c4eb..f06520d1a 100644
--- a/dev-python/pybedtools/pybedtools-0.12.0.ebuild
+++ b/dev-python/pybedtools/pybedtools-0.12.0.ebuild
@@ -3,7 +3,7 @@
 
 EAPI=8
 
-PYTHON_COMPAT=( python3_{10..12} )
+PYTHON_COMPAT=( python3_{10..13} )
 DISTUTILS_USE_PEP517=setuptools
 DISTUTILS_EXT=1
 inherit distutils-r1 flag-o-matic