From: "Pacho Ramos" <pacho@gentoo.org>
To: gentoo-commits@lists.gentoo.org
Subject: [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/dssp/
Date: Fri, 31 Jan 2025 18:35:42 +0000 (UTC) [thread overview]
Message-ID: <1738346086.bfc72640683c8352738f10f6c10114e655b9a443.pacho@gentoo> (raw)
commit: bfc72640683c8352738f10f6c10114e655b9a443
Author: Pacho Ramos <pacho <AT> gentoo <DOT> org>
AuthorDate: Fri Jan 31 17:54:46 2025 +0000
Commit: Pacho Ramos <pacho <AT> gentoo <DOT> org>
CommitDate: Fri Jan 31 17:54:46 2025 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=bfc72640
sci-chemistry/dssp: drop 4.4.7, 4.4.8
Signed-off-by: Pacho Ramos <pacho <AT> gentoo.org>
sci-chemistry/dssp/Manifest | 2 --
sci-chemistry/dssp/dssp-4.4.7.ebuild | 55 ------------------------------------
sci-chemistry/dssp/dssp-4.4.8.ebuild | 55 ------------------------------------
3 files changed, 112 deletions(-)
diff --git a/sci-chemistry/dssp/Manifest b/sci-chemistry/dssp/Manifest
index f6a7abf02265..25a5ff93dd17 100644
--- a/sci-chemistry/dssp/Manifest
+++ b/sci-chemistry/dssp/Manifest
@@ -1,5 +1,3 @@
DIST dssp-2.2.1.tgz 47141 BLAKE2B 34d8b2db8797a8c23763766c0214337f03584c4be52c1bc820a0df0db6a5f78ac0229aafdd47a60b8fd6f4832abf0399663c53f9e898c75f08ecbe22b141c8da SHA512 4a273714d6b3230daea166caa7f4117d5ccb225bea0cf1bc2eb61539b6cc8e227d0ba19047d61f0ad0d1d6bc2efdec9c193bd44341e15ef0950acb4a22498811
DIST dssp-3.0.11.tar.gz 168085 BLAKE2B e1c42fd22cfb2287f10b5deae48b56a4583d4a67737a3485dcbd160d1597a15c2d5105c3794c875d8001abede1c014efb4f7f5b7c250f867bdf9ed95a0860217 SHA512 a0cfe44e517ff1f909ef2928b62ae2c639c6bddfd8a0fb538883f647fd2771e00da68e0fd2521aa02ba3c6d1b0c9b784b7fe142392af3a3abf6ea89f1546bd9d
DIST dssp-4.4.10.tar.gz 164259 BLAKE2B 5d82ce25779060f89b50742683102aea53984fca10e54aa3cd0b21c7be3684336f6561928282e40300bb164c5b881797fababa5175c139f5b304a952f21db661 SHA512 1bdbdd4b058801d78cc28dcb23478656dfb322ce81f4fe8ede2cd72640778084ce8c99aff367aff53c26ad221ffa6ebafcf9730005b1a873957d26eb42f724c8
-DIST dssp-4.4.7.tar.gz 163831 BLAKE2B 195c8fb183df00105098967850b01c0d6acf776f7cfa409fc536c8291e7a467da2adfb5f34d8191e33dbb29bfd254cd414c1b7b76ed3f3b854928c4dc8a5fcdd SHA512 2fe2d8a494b570934c0d28804fe69b6569089ded58ec92bf3d83b25ce60a3b9486490909e187b511328f13498ca9027869e922d95a355cf0e21c2564c2db1b5a
-DIST dssp-4.4.8.tar.gz 164050 BLAKE2B 0f048b5425f3ecb0e9278da81e2274e817b5ba5ed33a372d0e4c0b0d0600f9ebee2b125f7411dcc4af5d56e2f86cf0d7f10608467b24dd886ca559f7c4b60e6a SHA512 a21c79e56662d926e8476ffc7ccd84dec182a7bbd98c08b3df61ed88c99ee82e1522b69156cdea0abf96d93bc69a0a491b04662a9312d2681785116074151a61
diff --git a/sci-chemistry/dssp/dssp-4.4.7.ebuild b/sci-chemistry/dssp/dssp-4.4.7.ebuild
deleted file mode 100644
index d5e51fe40fec..000000000000
--- a/sci-chemistry/dssp/dssp-4.4.7.ebuild
+++ /dev/null
@@ -1,55 +0,0 @@
-# Copyright 1999-2024 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-inherit cmake
-
-DESCRIPTION="The protein secondary structure standard"
-HOMEPAGE="https://swift.cmbi.umcn.nl/gv/dssp/ https://github.com/PDB-REDO/dssp"
-SRC_URI="https://github.com/PDB-REDO/${PN}/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz"
-
-LICENSE="BSD-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-# doc disabled as it only generates a PDF from the manpage for now
-# https://github.com/PDB-REDO/dssp/issues/64
-#IUSE="doc"
-
-CDEPEND="
- dev-libs/boost:=[zlib]
- >=dev-libs/libmcfp-1.2.2
- >=sci-libs/libcifpp-7.0.3
-"
-BDEPEND="${CDEPEND}
- dev-cpp/catch:0
-"
-# doc? (
-# || ( app-text/pandoc-bin[pandoc-symlink] app-text/pandoc )
-# dev-python/weasyprint
-# )
-RDEPEND="${CDEPEND}"
-
-#src_prepare() {
-# # wkhtmltopdf is not available on Gentoo
-# sed -i -e \
-# 's/-t html/-t html --pdf-engine=weasyprint/' \
-# CMakeLists.txt
-# cmake_src_prepare
-#}
-
-src_configure() {
- local mycmakeargs=(
- #-DBUILD_DOCUMENTATION=$(usex doc)
- -DBUILD_DOCUMENTATION=NO
- )
- cmake_src_configure
-}
-
-pkg_postinst() {
- if has_version "<=sci-chemistry/gromacs-2022"; then
- ewarn "DSSP > 3.0.x is not compatible with gmx do_dssp:"
- ewarn "https://gitlab.com/gromacs/gromacs/-/issues/4129"
- ewarn
- ewarn "Feel free to mask newer versions if needed."
- fi
-}
diff --git a/sci-chemistry/dssp/dssp-4.4.8.ebuild b/sci-chemistry/dssp/dssp-4.4.8.ebuild
deleted file mode 100644
index d5e51fe40fec..000000000000
--- a/sci-chemistry/dssp/dssp-4.4.8.ebuild
+++ /dev/null
@@ -1,55 +0,0 @@
-# Copyright 1999-2024 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-inherit cmake
-
-DESCRIPTION="The protein secondary structure standard"
-HOMEPAGE="https://swift.cmbi.umcn.nl/gv/dssp/ https://github.com/PDB-REDO/dssp"
-SRC_URI="https://github.com/PDB-REDO/${PN}/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz"
-
-LICENSE="BSD-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-# doc disabled as it only generates a PDF from the manpage for now
-# https://github.com/PDB-REDO/dssp/issues/64
-#IUSE="doc"
-
-CDEPEND="
- dev-libs/boost:=[zlib]
- >=dev-libs/libmcfp-1.2.2
- >=sci-libs/libcifpp-7.0.3
-"
-BDEPEND="${CDEPEND}
- dev-cpp/catch:0
-"
-# doc? (
-# || ( app-text/pandoc-bin[pandoc-symlink] app-text/pandoc )
-# dev-python/weasyprint
-# )
-RDEPEND="${CDEPEND}"
-
-#src_prepare() {
-# # wkhtmltopdf is not available on Gentoo
-# sed -i -e \
-# 's/-t html/-t html --pdf-engine=weasyprint/' \
-# CMakeLists.txt
-# cmake_src_prepare
-#}
-
-src_configure() {
- local mycmakeargs=(
- #-DBUILD_DOCUMENTATION=$(usex doc)
- -DBUILD_DOCUMENTATION=NO
- )
- cmake_src_configure
-}
-
-pkg_postinst() {
- if has_version "<=sci-chemistry/gromacs-2022"; then
- ewarn "DSSP > 3.0.x is not compatible with gmx do_dssp:"
- ewarn "https://gitlab.com/gromacs/gromacs/-/issues/4129"
- ewarn
- ewarn "Feel free to mask newer versions if needed."
- fi
-}
next reply other threads:[~2025-01-31 18:35 UTC|newest]
Thread overview: 57+ messages / expand[flat|nested] mbox.gz Atom feed top
2025-01-31 18:35 Pacho Ramos [this message]
-- strict thread matches above, loose matches on Subject: below --
2025-10-05 9:11 [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/dssp/ Pacho Ramos
2025-10-05 9:11 Pacho Ramos
2025-10-05 9:11 Pacho Ramos
2025-08-14 12:59 Pacho Ramos
2025-08-14 12:59 Pacho Ramos
2025-07-10 19:25 Arthur Zamarin
2025-05-24 3:00 Sam James
2025-05-22 14:07 Pacho Ramos
2025-05-22 14:07 Pacho Ramos
2025-04-13 16:44 Pacho Ramos
2025-04-13 16:44 Pacho Ramos
2025-04-13 16:44 Pacho Ramos
2025-04-13 16:44 Pacho Ramos
2025-03-05 18:12 Pacho Ramos
2025-01-13 12:56 Sam James
2024-10-17 11:56 Pacho Ramos
2024-10-17 8:51 Pacho Ramos
2024-10-17 8:51 Pacho Ramos
2024-06-01 11:08 Pacho Ramos
2024-05-18 10:06 Pacho Ramos
2024-05-18 10:06 Pacho Ramos
2024-05-18 10:06 Pacho Ramos
2023-10-26 15:09 Pacho Ramos
2023-07-21 8:01 Pacho Ramos
2023-07-21 8:01 Pacho Ramos
2023-07-20 8:12 Pacho Ramos
2023-07-20 8:12 Pacho Ramos
2023-06-08 9:39 Pacho Ramos
2023-04-18 15:08 Pacho Ramos
2023-02-26 15:51 Pacho Ramos
2023-02-26 15:51 Pacho Ramos
2023-01-02 14:04 Andreas Sturmlechner
2022-12-05 20:17 Arthur Zamarin
2022-12-04 14:50 Pacho Ramos
2022-12-04 14:50 Pacho Ramos
2022-09-04 13:03 David Seifert
2022-09-04 12:23 David Seifert
2022-07-06 5:18 Arthur Zamarin
2022-06-02 4:03 Sam James
2022-03-17 13:36 Jakov Smolić
2022-03-13 18:36 Pacho Ramos
2021-11-16 10:08 Jakov Smolić
2021-11-16 7:50 Agostino Sarubbo
2021-11-16 3:14 Sam James
2021-11-06 8:53 Pacho Ramos
2021-11-06 8:53 Pacho Ramos
2021-10-10 20:48 Sam James
2021-10-05 6:48 Agostino Sarubbo
2021-10-04 11:00 Agostino Sarubbo
2021-10-03 18:45 Pacho Ramos
2021-09-02 12:01 Pacho Ramos
2021-09-02 12:01 Pacho Ramos
2021-09-02 12:01 Pacho Ramos
2021-09-02 12:01 Pacho Ramos
2021-09-02 12:01 Pacho Ramos
2021-06-18 19:18 David Seifert
Reply instructions:
You may reply publicly to this message via plain-text email
using any one of the following methods:
* Save the following mbox file, import it into your mail client,
and reply-to-all from there: mbox
Avoid top-posting and favor interleaved quoting:
https://en.wikipedia.org/wiki/Posting_style#Interleaved_style
* Reply using the --to, --cc, and --in-reply-to
switches of git-send-email(1):
git send-email \
--in-reply-to=1738346086.bfc72640683c8352738f10f6c10114e655b9a443.pacho@gentoo \
--to=pacho@gentoo.org \
--cc=gentoo-commits@lists.gentoo.org \
--cc=gentoo-dev@lists.gentoo.org \
/path/to/YOUR_REPLY
https://kernel.org/pub/software/scm/git/docs/git-send-email.html
* If your mail client supports setting the In-Reply-To header
via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line
before the message body.
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox