From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (2048 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 7310415838C for ; Tue, 30 Jan 2024 14:05:10 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 5FB22E29B2; Tue, 30 Jan 2024 14:05:09 +0000 (UTC) Received: from smtp.gentoo.org (woodpecker.gentoo.org [140.211.166.183]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 0A1F3E29B2 for ; Tue, 30 Jan 2024 14:05:09 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 1B85934301D for ; Tue, 30 Jan 2024 14:05:08 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 54F9714BE for ; Tue, 30 Jan 2024 14:05:05 +0000 (UTC) From: "Andrew Ammerlaan" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Andrew Ammerlaan" Message-ID: <1706623292.5f2709bb2dee51ca95791f91c71aee2f7711d593.andrewammerlaan@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/multiqc/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/multiqc/metadata.xml sci-biology/multiqc/multiqc-1.19.ebuild X-VCS-Directories: sci-biology/multiqc/ X-VCS-Committer: andrewammerlaan X-VCS-Committer-Name: Andrew Ammerlaan X-VCS-Revision: 5f2709bb2dee51ca95791f91c71aee2f7711d593 X-VCS-Branch: master Date: Tue, 30 Jan 2024 14:05:05 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 7f97b0b5-1603-4b37-8313-3e7c1cb1476f X-Archives-Hash: 8432d462e248130f74fef49b4083f388 commit: 5f2709bb2dee51ca95791f91c71aee2f7711d593 Author: Michael Schubert gmail com> AuthorDate: Mon Jan 29 21:51:25 2024 +0000 Commit: Andrew Ammerlaan gentoo org> CommitDate: Tue Jan 30 14:01:32 2024 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=5f2709bb sci-biology/multiqc: add ebuild Signed-off-by: Michael Schubert gmail.com> Closes: https://github.com/gentoo/sci/pull/1223 Signed-off-by: Andrew Ammerlaan gentoo.org> sci-biology/multiqc/metadata.xml | 12 ++++++++++ sci-biology/multiqc/multiqc-1.19.ebuild | 40 +++++++++++++++++++++++++++++++++ 2 files changed, 52 insertions(+) diff --git a/sci-biology/multiqc/metadata.xml b/sci-biology/multiqc/metadata.xml new file mode 100644 index 000000000..09bd2b6e6 --- /dev/null +++ b/sci-biology/multiqc/metadata.xml @@ -0,0 +1,12 @@ + + + + + mschu.dev@gmail.com + Michael Schubert + + + ewels/MultiQC + multiqc + + diff --git a/sci-biology/multiqc/multiqc-1.19.ebuild b/sci-biology/multiqc/multiqc-1.19.ebuild new file mode 100644 index 000000000..187f06c22 --- /dev/null +++ b/sci-biology/multiqc/multiqc-1.19.ebuild @@ -0,0 +1,40 @@ +# Copyright 1999-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +DISTUTILS_USE_PEP517=setuptools +PYTHON_COMPAT=( python3_{10..11} ) + +inherit pypi distutils-r1 + +DESCRIPTION="Aggregate bioinformatics results across many samples into a single report" +HOMEPAGE="https://multiqc.info/" + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="~amd64 ~amd64-linux" + +RDEPEND="dev-python/matplotlib[${PYTHON_USEDEP}] + dev-python/networkx[${PYTHON_USEDEP}] + dev-python/numpy[${PYTHON_USEDEP}] + dev-python/click[${PYTHON_USEDEP}] + dev-python/coloredlogs[${PYTHON_USEDEP}] + dev-python/future[${PYTHON_USEDEP}] + dev-python/jinja[${PYTHON_USEDEP}] + dev-python/lzstring[${PYTHON_USEDEP}] + dev-python/markdown[${PYTHON_USEDEP}] + dev-python/packaging[${PYTHON_USEDEP}] + dev-python/pyyaml[${PYTHON_USEDEP}] + dev-python/requests[${PYTHON_USEDEP}] + dev-python/rich[${PYTHON_USEDEP}] + dev-python/rich-click[${PYTHON_USEDEP}] + dev-python/simplejson[${PYTHON_USEDEP}] + dev-python/spectra[${PYTHON_USEDEP}] + dev-python/importlib-metadata[$PYTHON_USEDEP] + dev-python/humanize[$PYTHON_USEDEP] + dev-python/pyaml-env[$PYTHON_USEDEP]" + +# pypi tarball does not include tests +RESTRICT="test" +#distutils_enable_tests pytest