From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (2048 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 1BF6615ACFB for ; Sun, 23 Apr 2023 20:25:11 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 5F378E09B7; Sun, 23 Apr 2023 20:25:10 +0000 (UTC) Received: from smtp.gentoo.org (woodpecker.gentoo.org [140.211.166.183]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id D9B2DE09B7 for ; Sun, 23 Apr 2023 20:25:09 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id EBBBD341272 for ; Sun, 23 Apr 2023 20:25:08 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 8C2F37DE for ; Sun, 23 Apr 2023 20:25:07 +0000 (UTC) From: "Michał Górny" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Michał Górny" Message-ID: <1682281503.447192cef100fffffaeee5cf6e598c6694f2f015.mgorny@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: dev-python/numpy/ X-VCS-Repository: repo/gentoo X-VCS-Files: dev-python/numpy/Manifest dev-python/numpy/numpy-1.24.3.ebuild X-VCS-Directories: dev-python/numpy/ X-VCS-Committer: mgorny X-VCS-Committer-Name: Michał Górny X-VCS-Revision: 447192cef100fffffaeee5cf6e598c6694f2f015 X-VCS-Branch: master Date: Sun, 23 Apr 2023 20:25:07 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 6004176d-29c3-43f7-a7d4-ed089da14e29 X-Archives-Hash: 0187ae5fb580c7215b343eba03a48aa1 commit: 447192cef100fffffaeee5cf6e598c6694f2f015 Author: Michał Górny gentoo org> AuthorDate: Sun Apr 23 17:24:11 2023 +0000 Commit: Michał Górny gentoo org> CommitDate: Sun Apr 23 20:25:03 2023 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=447192ce dev-python/numpy: Bump to 1.24.3 Signed-off-by: Michał Górny gentoo.org> dev-python/numpy/Manifest | 1 + dev-python/numpy/numpy-1.24.3.ebuild | 170 +++++++++++++++++++++++++++++++++++ 2 files changed, 171 insertions(+) diff --git a/dev-python/numpy/Manifest b/dev-python/numpy/Manifest index dd09c26f3071..03f5af123481 100644 --- a/dev-python/numpy/Manifest +++ b/dev-python/numpy/Manifest @@ -1,2 +1,3 @@ DIST numpy-1.24.0.tar.gz 10897101 BLAKE2B 59e2b913f90de76589d8fbb2f07e2d389012c7f6ce9bd641bc4837776465ce9c41c34f19f92bee55d4bae6245c1d2c84315b359ef0b089fd68d31cd7e7ec44b1 SHA512 3b4e6255b8d39e8504a50ecd3c2ba09d5b16d3f6c70b23b67e4dbf03d1fe390c55030f46090341d39a1ee8228c61ad6212fdc6e4579fcec9e26b4dbe70268661 DIST numpy-1.24.2.tar.gz 10906862 BLAKE2B e48f65eab709f0c57ec378d813a7b65bcaca6d5960b559d6db1c60726e5cf12517f4b2e1636b0ff815a2109925edccba200270db5170fd0aff5fd635919165ac SHA512 145fd7fb3919a185f75076d51b92c54a7fb1b776b637752ca15fdee15b239d6a517ef1bb8cded7c92e059cf6cda0146c24943c042d19b791e81125bc0ad4b820 +DIST numpy-1.24.3.tar.gz 10909904 BLAKE2B 3b14f8b6a7bd484de43c3b0e57f161388d6226e05ed9bc3d1edfaafc713b9597c7574b9b9c20b4e3a6bd291d32a607d95c72d6e25fa346ffdaf97c94767bc315 SHA512 d4b5841cbe68ee6653f99018e4e0182f2e5519a1cd69c14e0a95aa180f878e6a6786ccf0a7c78bf0d511c53e7535d7144fee428572dec7a4b60b25c8a1c0c9e1 diff --git a/dev-python/numpy/numpy-1.24.3.ebuild b/dev-python/numpy/numpy-1.24.3.ebuild new file mode 100644 index 000000000000..57a4812e6bfc --- /dev/null +++ b/dev-python/numpy/numpy-1.24.3.ebuild @@ -0,0 +1,170 @@ +# Copyright 1999-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +DISTUTILS_EXT=1 +PYTHON_COMPAT=( python3_{9..11} pypy3 ) +PYTHON_REQ_USE="threads(+)" + +FORTRAN_NEEDED=lapack + +inherit distutils-r1 flag-o-matic fortran-2 multiprocessing pypi +inherit toolchain-funcs + +DOC_PV=${PV} +DESCRIPTION="Fast array and numerical python library" +HOMEPAGE=" + https://numpy.org/ + https://github.com/numpy/numpy/ + https://pypi.org/project/numpy/ +" + +LICENSE="BSD" +SLOT="0" +KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~loong ~m68k ~mips ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~sparc-solaris ~x64-solaris ~x86-solaris" +IUSE="lapack" + +RDEPEND=" + lapack? ( + >=virtual/cblas-3.8 + >=virtual/lapack-3.8 + ) +" +BDEPEND=" + ${RDEPEND} + =dev-python/cython-0.29.30[${PYTHON_USEDEP}] + lapack? ( + virtual/pkgconfig + ) + test? ( + $(python_gen_cond_dep ' + >=dev-python/cffi-1.14.0[${PYTHON_USEDEP}] + ' 'python*') + dev-python/charset_normalizer[${PYTHON_USEDEP}] + >=dev-python/hypothesis-5.8.0[${PYTHON_USEDEP}] + dev-python/pytest-xdist[${PYTHON_USEDEP}] + >=dev-python/pytz-2019.3[${PYTHON_USEDEP}] + ) +" + +PATCHES=( + "${FILESDIR}"/numpy-1.22.0-no-hardcode-blasv2.patch +) + +distutils_enable_tests pytest + +python_prepare_all() { + # Allow use with setuptools 60.x + # See numpy-1.22.1-revert-setuptools-upper-bound.patch for details + export SETUPTOOLS_USE_DISTUTILS=stdlib + + if use lapack; then + local incdir="${EPREFIX}"/usr/include + local libdir="${EPREFIX}"/usr/$(get_libdir) + cat >> site.cfg <<-EOF || die + [blas] + include_dirs = ${incdir} + library_dirs = ${libdir} + blas_libs = cblas,blas + [lapack] + library_dirs = ${libdir} + lapack_libs = lapack + EOF + else + export {ATLAS,PTATLAS,BLAS,LAPACK,MKL}=None + fi + + export CC="$(tc-getCC) ${CFLAGS}" + + append-flags -fno-strict-aliasing + + # See progress in http://projects.scipy.org/scipy/numpy/ticket/573 + # with the subtle difference that we don't want to break Darwin where + # -shared is not a valid linker argument + if [[ ${CHOST} != *-darwin* ]]; then + append-ldflags -shared + fi + + # only one fortran to link with: + # linking with cblas and lapack library will force + # autodetecting and linking to all available fortran compilers + append-fflags -fPIC + if use lapack; then + NUMPY_FCONFIG="config_fc --noopt --noarch" + # workaround bug 335908 + [[ $(tc-getFC) == *gfortran* ]] && NUMPY_FCONFIG+=" --fcompiler=gnu95" + fi + + # don't version f2py, we will handle it. + sed -i -e '/f2py_exe/s: + os\.path.*$::' numpy/f2py/setup.py || die + + distutils-r1_python_prepare_all +} + +python_compile() { + local -x MAKEOPTS=-j1 #660754 + + distutils-r1_python_compile ${NUMPY_FCONFIG} +} + +python_test() { + local EPYTEST_DESELECT=( + # very disk- and memory-hungry + numpy/lib/tests/test_histograms.py::TestHistogram::test_big_arrays + numpy/lib/tests/test_io.py::test_large_zip + + # precision problems + numpy/core/tests/test_umath_accuracy.py::TestAccuracy::test_validate_transcendentals + + # runs the whole test suite recursively, that's just crazy + numpy/core/tests/test_mem_policy.py::test_new_policy + + # very slow, unlikely to be practically useful + numpy/typing/tests/test_typing.py + ) + + if use arm && [[ $(uname -m || echo "unknown") == "armv8l" ]] ; then + # Degenerate case. arm32 chroot on arm64. + # bug #774108 + EPYTEST_DESELECT+=( + numpy/core/tests/test_cpu_features.py::Test_ARM_Features::test_features + ) + fi + + if use x86 ; then + EPYTEST_DESELECT+=( + # https://github.com/numpy/numpy/issues/18388 + numpy/core/tests/test_umath.py::TestRemainder::test_float_remainder_overflow + # https://github.com/numpy/numpy/issues/18387 + numpy/random/tests/test_generator_mt19937.py::TestRandomDist::test_pareto + # more precision problems + numpy/core/tests/test_einsum.py::TestEinsum::test_einsum_sums_int16 + ) + fi + if use arm || use x86 ; then + EPYTEST_DESELECT+=( + # too large for 32-bit platforms + numpy/core/tests/test_ufunc.py::TestUfunc::test_identityless_reduction_huge_array + ) + fi + + distutils_install_for_testing --single-version-externally-managed \ + --record "${TMPDIR}/record.txt" ${NUMPY_FCONFIG} + + cd "${TEST_DIR}/lib" || die + epytest -k "not _fuzz" -n "$(makeopts_jobs)" +} + +python_install() { + # https://github.com/numpy/numpy/issues/16005 + local mydistutilsargs=( build_src ) + distutils-r1_python_install ${NUMPY_FCONFIG} + python_optimize +} + +python_install_all() { + local DOCS=( LICENSE.txt README.md THANKS.txt ) + distutils-r1_python_install_all +}