From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (2048 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id A715F158020 for ; Sun, 25 Dec 2022 22:15:20 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 883EFE08C3; Sun, 25 Dec 2022 22:15:08 +0000 (UTC) Received: from smtp.gentoo.org (woodpecker.gentoo.org [140.211.166.183]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 6E11FE08C3 for ; Sun, 25 Dec 2022 22:15:08 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 892BD340FD0 for ; Sun, 25 Dec 2022 22:15:07 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 18A0B6F2 for ; Sun, 25 Dec 2022 22:15:06 +0000 (UTC) From: "Alexey Shvetsov" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Alexey Shvetsov" Message-ID: <1672006499.1b327b9680ee5a6b83e2f600aa177da6796152a5.alexxy@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/ X-VCS-Repository: repo/gentoo X-VCS-Files: sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild sci-chemistry/MDAnalysis/Manifest X-VCS-Directories: sci-chemistry/MDAnalysis/ X-VCS-Committer: alexxy X-VCS-Committer-Name: Alexey Shvetsov X-VCS-Revision: 1b327b9680ee5a6b83e2f600aa177da6796152a5 X-VCS-Branch: master Date: Sun, 25 Dec 2022 22:15:06 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 754936e4-ddd1-4026-9dbf-c98b7a5a3e3d X-Archives-Hash: 02a6d698c5980e9690f21c9d3cc0bbfe commit: 1b327b9680ee5a6b83e2f600aa177da6796152a5 Author: Alexey Shvetsov gentoo org> AuthorDate: Sun Dec 25 22:13:18 2022 +0000 Commit: Alexey Shvetsov gentoo org> CommitDate: Sun Dec 25 22:14:59 2022 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1b327b96 sci-chemistry/MDAnalysis: Version bump. No longer depend on nose Closes: https://bugs.gentoo.org/765160 Closes: https://bugs.gentoo.org/878723 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild | 37 ---------------------- ...alysis-2.0.0.ebuild => MDAnalysis-2.4.1.ebuild} | 6 ++-- sci-chemistry/MDAnalysis/Manifest | 3 +- 3 files changed, 5 insertions(+), 41 deletions(-) diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild deleted file mode 100644 index 1f9c2ac3aa5e..000000000000 --- a/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild +++ /dev/null @@ -1,37 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -PYTHON_COMPAT=( python3_{7..10} ) - -inherit distutils-r1 - -DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories" -HOMEPAGE="https://www.mdanalysis.org" -SRC_URI="mirror://pypi/M/${PN}/${P}.tar.gz" - -SLOT="0" -LICENSE="GPL-2" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="test" - -RDEPEND=" - >=dev-python/numpy-1.13.3[${PYTHON_USEDEP}] - >=dev-python/scipy-1.0.0[${PYTHON_USEDEP}] - >=sci-biology/biopython-1.71[${PYTHON_USEDEP}] - >=dev-python/networkx-1.0[${PYTHON_USEDEP}] - >=dev-python/GridDataFormats-0.4.0[${PYTHON_USEDEP}] - >=dev-python/joblib-0.12[${PYTHON_USEDEP}] - >=dev-python/matplotlib-1.5.1[${PYTHON_USEDEP}] - dev-python/netcdf4-python[${PYTHON_USEDEP}] - >=dev-python/mmtf-python-1.0.0[${PYTHON_USEDEP}] - >=dev-python/gsd-1.9.3[${PYTHON_USEDEP}] - dev-python/mock[${PYTHON_USEDEP}] - dev-python/duecredit[${PYTHON_USEDEP}] - >=dev-python/six-1.4.0[${PYTHON_USEDEP}] - >=dev-python/tqdm-4.43.0[${PYTHON_USEDEP}] -" -BDEPEND="${RDEPEND}" - -distutils_enable_tests nose diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild similarity index 91% rename from sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild rename to sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild index aee4e82b683e..5d561772ca51 100644 --- a/sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild +++ b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild @@ -1,10 +1,12 @@ -# Copyright 1999-2021 Gentoo Authors +# Copyright 1999-2022 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=8 PYTHON_COMPAT=( python3_{8..10} ) +DISTUTILS_USE_PEP517=setuptools + inherit distutils-r1 DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories" @@ -34,4 +36,4 @@ RDEPEND=" " BDEPEND="${RDEPEND}" -distutils_enable_tests nose +distutils_enable_tests pytest diff --git a/sci-chemistry/MDAnalysis/Manifest b/sci-chemistry/MDAnalysis/Manifest index 721870b0e526..81a4e8053d86 100644 --- a/sci-chemistry/MDAnalysis/Manifest +++ b/sci-chemistry/MDAnalysis/Manifest @@ -1,2 +1 @@ -DIST MDAnalysis-1.0.0.tar.gz 19552874 BLAKE2B dab625a898d71a67a37ac5b58eb23ded9487f475e3c76f6c335a0ed5b32a43785d0473d089fcfc56c07263d82248bf5ee7b50c513441b10fc97f97b49411cc5f SHA512 4a001f45695308dd5f296bd2850d5d585c065e6b0f55efca65d91e452d78c85f13fd614eca0176a8d330e14a1c9e8ccbb919c3d4ae995b1945d09dc3ad687195 -DIST MDAnalysis-2.0.0.tar.gz 3436654 BLAKE2B b29734dd61bfa1e4e1d6ead0eb9a2d00869d1adce18edf95b9368bdcc16b0d71d0d6536a7df48787034a623bf52585e1636842dcaaa9dde08a69576868c1657b SHA512 037eb3c709b9ddbdb2ba9b26a6632ff99a95331c3968176573076e4e208c8644c3ea262e1e9880f185eb080ff90180d887444cab0dfbfad04fc254d87f1ff986 +DIST MDAnalysis-2.4.1.tar.gz 3746899 BLAKE2B af63f74a31dcde8a68cbffe5158f2f955d5eda1345bcff6a19e8df3284101b1e85006de3326d29d4fe1867dc6b0c5f55467b9e3242704f97440c6a43b52f47b8 SHA512 796dad98c26bd36f30db166bea5ff782aa5e3ac5cddb1675b628fb753a4f645fb27e06d3986047e2ba21a22cd91f96d0ba8e529256ed960a2b7cf95204076927