* [gentoo-commits] proj/sci:master commit in: dev-python/dandi-schema/files/, dev-python/dandi-schema/
@ 2022-05-02 7:21 Horea Christian
0 siblings, 0 replies; 2+ messages in thread
From: Horea Christian @ 2022-05-02 7:21 UTC (permalink / raw
To: gentoo-commits
commit: b3861c4b774b14f9017367bbc474d8890999dbf8
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Mon May 2 07:21:32 2022 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Mon May 2 07:21:32 2022 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=b3861c4b
dev-python/dandi-schema: new package
will deprecate dev-python/dandischema
Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
dev-python/dandi-schema/dandi-schema-0.4.3.ebuild | 46 ++++++++++++++++++++++
dev-python/dandi-schema/dandi-schema-0.5.1.ebuild | 42 ++++++++++++++++++++
dev-python/dandi-schema/dandi-schema-0.5.3.ebuild | 42 ++++++++++++++++++++
dev-python/dandi-schema/dandi-schema-0.6.0.ebuild | 42 ++++++++++++++++++++
.../files/dandi-schema-0.3.4-coverage.patch | 11 ++++++
.../files/dandi-schema-0.3.4-versioningit.patch | 10 +++++
dev-python/dandi-schema/metadata.xml | 26 ++++++++++++
7 files changed, 219 insertions(+)
diff --git a/dev-python/dandi-schema/dandi-schema-0.4.3.ebuild b/dev-python/dandi-schema/dandi-schema-0.4.3.ebuild
new file mode 100644
index 000000000..cf3c8a34f
--- /dev/null
+++ b/dev-python/dandi-schema/dandi-schema-0.4.3.ebuild
@@ -0,0 +1,46 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{8..10} )
+inherit distutils-r1
+
+DESCRIPTION="Schemata for DANDI archive project"
+HOMEPAGE="https://github.com/dandi/dandi-schema"
+SRC_URI="https://github.com/dandi/dandi-schema/archive/refs/tags/${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="Apache-2.0"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="test"
+RESTRICT="!test? ( test )"
+
+RDEPEND="
+ dev-python/wheel[${PYTHON_USEDEP}]
+ dev-python/jsonschema[${PYTHON_USEDEP}]
+ dev-python/pydantic[${PYTHON_USEDEP}]
+ dev-python/python-email-validator[${PYTHON_USEDEP}]
+ dev-python/requests[${PYTHON_USEDEP}]
+"
+DEPEND="
+ dev-python/setuptools[${PYTHON_USEDEP}]
+"
+
+PATCHES=(
+ "${FILESDIR}/${PN}-0.3.4-coverage.patch"
+ "${FILESDIR}/${PN}-0.3.4-versioningit.patch"
+)
+
+src_configure() {
+ echo "__version__ = '${PV}'" >> dandischema/_version.py
+}
+
+distutils_enable_tests pytest
+
+python_test() {
+ export DANDI_TESTS_NONETWORK=1
+ pushd dandischema || die
+ epytest tests
+ popd
+}
diff --git a/dev-python/dandi-schema/dandi-schema-0.5.1.ebuild b/dev-python/dandi-schema/dandi-schema-0.5.1.ebuild
new file mode 100644
index 000000000..19a906634
--- /dev/null
+++ b/dev-python/dandi-schema/dandi-schema-0.5.1.ebuild
@@ -0,0 +1,42 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+DISTUTILS_USE_PEP517=setuptools
+PYTHON_COMPAT=( python3_{8..10} )
+
+inherit distutils-r1
+
+DESCRIPTION="Schemata for DANDI archive project"
+HOMEPAGE="https://github.com/dandi/dandi-schema"
+SRC_URI="https://github.com/dandi/dandi-schema/archive/refs/tags/${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="Apache-2.0"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="
+ dev-python/wheel[${PYTHON_USEDEP}]
+ dev-python/jsonschema[${PYTHON_USEDEP}]
+ dev-python/pydantic[${PYTHON_USEDEP}]
+ dev-python/python-email-validator[${PYTHON_USEDEP}]
+ dev-python/requests[${PYTHON_USEDEP}]
+"
+
+PATCHES=(
+ "${FILESDIR}/${PN}-0.3.4-coverage.patch"
+)
+
+src_configure() {
+ echo "__version__ = '${PV}'" >> dandischema/_version.py
+}
+
+distutils_enable_tests pytest
+
+python_test() {
+ export DANDI_TESTS_NONETWORK=1
+ pushd dandischema || die
+ epytest tests
+ popd
+}
diff --git a/dev-python/dandi-schema/dandi-schema-0.5.3.ebuild b/dev-python/dandi-schema/dandi-schema-0.5.3.ebuild
new file mode 100644
index 000000000..19a906634
--- /dev/null
+++ b/dev-python/dandi-schema/dandi-schema-0.5.3.ebuild
@@ -0,0 +1,42 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+DISTUTILS_USE_PEP517=setuptools
+PYTHON_COMPAT=( python3_{8..10} )
+
+inherit distutils-r1
+
+DESCRIPTION="Schemata for DANDI archive project"
+HOMEPAGE="https://github.com/dandi/dandi-schema"
+SRC_URI="https://github.com/dandi/dandi-schema/archive/refs/tags/${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="Apache-2.0"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="
+ dev-python/wheel[${PYTHON_USEDEP}]
+ dev-python/jsonschema[${PYTHON_USEDEP}]
+ dev-python/pydantic[${PYTHON_USEDEP}]
+ dev-python/python-email-validator[${PYTHON_USEDEP}]
+ dev-python/requests[${PYTHON_USEDEP}]
+"
+
+PATCHES=(
+ "${FILESDIR}/${PN}-0.3.4-coverage.patch"
+)
+
+src_configure() {
+ echo "__version__ = '${PV}'" >> dandischema/_version.py
+}
+
+distutils_enable_tests pytest
+
+python_test() {
+ export DANDI_TESTS_NONETWORK=1
+ pushd dandischema || die
+ epytest tests
+ popd
+}
diff --git a/dev-python/dandi-schema/dandi-schema-0.6.0.ebuild b/dev-python/dandi-schema/dandi-schema-0.6.0.ebuild
new file mode 100644
index 000000000..19a906634
--- /dev/null
+++ b/dev-python/dandi-schema/dandi-schema-0.6.0.ebuild
@@ -0,0 +1,42 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+DISTUTILS_USE_PEP517=setuptools
+PYTHON_COMPAT=( python3_{8..10} )
+
+inherit distutils-r1
+
+DESCRIPTION="Schemata for DANDI archive project"
+HOMEPAGE="https://github.com/dandi/dandi-schema"
+SRC_URI="https://github.com/dandi/dandi-schema/archive/refs/tags/${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="Apache-2.0"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="
+ dev-python/wheel[${PYTHON_USEDEP}]
+ dev-python/jsonschema[${PYTHON_USEDEP}]
+ dev-python/pydantic[${PYTHON_USEDEP}]
+ dev-python/python-email-validator[${PYTHON_USEDEP}]
+ dev-python/requests[${PYTHON_USEDEP}]
+"
+
+PATCHES=(
+ "${FILESDIR}/${PN}-0.3.4-coverage.patch"
+)
+
+src_configure() {
+ echo "__version__ = '${PV}'" >> dandischema/_version.py
+}
+
+distutils_enable_tests pytest
+
+python_test() {
+ export DANDI_TESTS_NONETWORK=1
+ pushd dandischema || die
+ epytest tests
+ popd
+}
diff --git a/dev-python/dandi-schema/files/dandi-schema-0.3.4-coverage.patch b/dev-python/dandi-schema/files/dandi-schema-0.3.4-coverage.patch
new file mode 100644
index 000000000..a9c7b6c2b
--- /dev/null
+++ b/dev-python/dandi-schema/files/dandi-schema-0.3.4-coverage.patch
@@ -0,0 +1,11 @@
+--- a/tox.ini 2021-09-22 19:31:20.534576095 -0400
++++ b/tox.ini 2021-09-26 16:11:30.080164191 -0400
+@@ -17,7 +17,7 @@
+ flake8 --config=setup.cfg {posargs} dandischema setup.py
+
+ [pytest]
+-addopts = --cov=dandischema --tb=short --durations=10
++addopts = --tb=short --durations=10
+ filterwarnings = error
+
+ [coverage:run]
diff --git a/dev-python/dandi-schema/files/dandi-schema-0.3.4-versioningit.patch b/dev-python/dandi-schema/files/dandi-schema-0.3.4-versioningit.patch
new file mode 100644
index 000000000..589091756
--- /dev/null
+++ b/dev-python/dandi-schema/files/dandi-schema-0.3.4-versioningit.patch
@@ -0,0 +1,10 @@
+--- a/setup.py 2021-09-22 19:31:20.533576086 -0400
++++ b/setup.py 2021-09-23 07:42:02.856983656 -0400
+@@ -21,7 +21,7 @@
+
+ # Give setuptools a hint to complain if it's too old a version
+ # Should match pyproject.toml
+-SETUP_REQUIRES = ["setuptools >= 42.0.0", "versioningit ~= 0.1.0"]
++SETUP_REQUIRES = ["setuptools >= 42.0.0"]
+ # This enables setuptools to install wheel on-the-fly
+ SETUP_REQUIRES += ["wheel"] if "bdist_wheel" in sys.argv else []
diff --git a/dev-python/dandi-schema/metadata.xml b/dev-python/dandi-schema/metadata.xml
new file mode 100644
index 000000000..91cb893fc
--- /dev/null
+++ b/dev-python/dandi-schema/metadata.xml
@@ -0,0 +1,26 @@
+<?xml version='1.0' encoding='UTF-8'?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <maintainer type="person">
+ <email>gentoo@chymera.eu</email>
+ <name>Horea Christian</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
+ A Python library for maintaining and managing DANDI metadata schemata.
+ The library helps create and validate DANDI schema-compliant metadata
+ for Dandisets and assets. Every Dandiset and associated asset has a
+ metadata object that can be retrieved using the DANDI API. This
+ library uses Pydantic to implement all the metadata classes. Schemas
+ are generated on schema modifications and placed into this repository.
+ Dandischema generates JSON schema definitions and also an associated
+ context.json file for JSON-LD compliance of the metadata models.
+ </longdescription>
+ <upstream>
+ <remote-id type="github">dandi/dandi-schema</remote-id>
+ <remote-id type="pypi">dandischema</remote-id>
+ </upstream>
+</pkgmetadata>
^ permalink raw reply related [flat|nested] 2+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/dandi-schema/files/, dev-python/dandi-schema/
@ 2024-02-12 12:52 Horea Christian
0 siblings, 0 replies; 2+ messages in thread
From: Horea Christian @ 2024-02-12 12:52 UTC (permalink / raw
To: gentoo-commits
commit: 4d7bcc38e83eee1117b899a36bd44d4372eeaa98
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Mon Feb 12 12:52:32 2024 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Mon Feb 12 12:52:32 2024 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=4d7bcc38
dev-python/dandi-schema: add 0.9.1
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
dev-python/dandi-schema/dandi-schema-0.9.1.ebuild | 49 ++++++++++++++++++++++
.../files/dandi-schema-0.9.1-coverage.patch | 13 ++++++
2 files changed, 62 insertions(+)
diff --git a/dev-python/dandi-schema/dandi-schema-0.9.1.ebuild b/dev-python/dandi-schema/dandi-schema-0.9.1.ebuild
new file mode 100644
index 000000000..0e7986806
--- /dev/null
+++ b/dev-python/dandi-schema/dandi-schema-0.9.1.ebuild
@@ -0,0 +1,49 @@
+# Copyright 1999-2023 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+DISTUTILS_USE_PEP517=setuptools
+PYTHON_COMPAT=( python3_{10..12} )
+
+inherit distutils-r1
+
+DESCRIPTION="Schemata for DANDI archive project"
+HOMEPAGE="https://github.com/dandi/dandi-schema"
+SRC_URI="https://github.com/dandi/dandi-schema/archive/refs/tags/${PV}.tar.gz -> ${P}.gh.tar.gz"
+
+LICENSE="Apache-2.0"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+# Package has pydantic version restriction (2.4*), which, however, breaks the test suite:
+# https://github.com/dandi/dandi-schema/issues/228
+# Commented failing tests with upstream version restriction listed below.
+RDEPEND="
+ dev-python/wheel[${PYTHON_USEDEP}]
+ dev-python/jsonschema[${PYTHON_USEDEP}]
+ >=dev-python/pydantic-2.5[${PYTHON_USEDEP}]
+ dev-python/email-validator[${PYTHON_USEDEP}]
+ dev-python/requests[${PYTHON_USEDEP}]
+"
+
+PATCHES=(
+ "${FILESDIR}/${P}-coverage.patch"
+)
+
+src_configure() {
+ echo "__version__ = '${PV}'" >> dandischema/_version.py
+}
+
+#EPYTEST_DESELECT=(
+# "dandischema/tests/test_metadata.py::test_asset"
+# "dandischema/tests/test_metadata.py::test_aggregate[files1-summary1]"
+# "dandischema/tests/test_metadata.py::test_aggregate[files2-summary2]"
+#)
+
+distutils_enable_tests pytest
+
+python_test() {
+ export DANDI_TESTS_NONETWORK=1
+ epytest dandischema
+}
diff --git a/dev-python/dandi-schema/files/dandi-schema-0.9.1-coverage.patch b/dev-python/dandi-schema/files/dandi-schema-0.9.1-coverage.patch
new file mode 100644
index 000000000..7f9b7dba0
--- /dev/null
+++ b/dev-python/dandi-schema/files/dandi-schema-0.9.1-coverage.patch
@@ -0,0 +1,13 @@
+diff --git a/tox.ini b/tox.ini
+index c32f3b9..d552c6c 100644
+--- a/tox.ini
++++ b/tox.ini
+@@ -30,7 +30,7 @@ commands =
+ mypy dandischema
+
+ [pytest]
+-addopts = --cov=dandischema --tb=short --durations=10
++addopts = --tb=short --durations=10
+ filterwarnings =
+ error
+ # <https://github.com/dateutil/dateutil/issues/1284>
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