From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (2048 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id AE98315808B for ; Sun, 27 Feb 2022 22:52:21 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id F3F6DE0809; Sun, 27 Feb 2022 22:52:20 +0000 (UTC) Received: from smtp.gentoo.org (woodpecker.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id DB134E0809 for ; Sun, 27 Feb 2022 22:52:20 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id EC32B3433F8 for ; Sun, 27 Feb 2022 22:52:19 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 4B2BF2CB for ; Sun, 27 Feb 2022 22:52:18 +0000 (UTC) From: "Sam James" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Sam James" Message-ID: <1646002321.1489c366aee882be497075a8e99c4218f34d6c15.sam@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/tm-align/ X-VCS-Repository: repo/gentoo X-VCS-Files: sci-chemistry/tm-align/tm-align-20150914-r1.ebuild X-VCS-Directories: sci-chemistry/tm-align/ X-VCS-Committer: sam X-VCS-Committer-Name: Sam James X-VCS-Revision: 1489c366aee882be497075a8e99c4218f34d6c15 X-VCS-Branch: master Date: Sun, 27 Feb 2022 22:52:18 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 60e0caf5-6162-4bfc-8fcf-65e17cb21cd6 X-Archives-Hash: c0a6f9fd693ac509bd45eed7cf6a3ec0 commit: 1489c366aee882be497075a8e99c4218f34d6c15 Author: Sam James gentoo org> AuthorDate: Sun Feb 27 22:52:01 2022 +0000 Commit: Sam James gentoo org> CommitDate: Sun Feb 27 22:52:01 2022 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1489c366 sci-chemistry/tm-align: update EAPI 6 -> 8 Bug: https://bugs.gentoo.org/834302 Signed-off-by: Sam James gentoo.org> sci-chemistry/tm-align/tm-align-20150914-r1.ebuild | 24 ++++++++++++++++++++++ 1 file changed, 24 insertions(+) diff --git a/sci-chemistry/tm-align/tm-align-20150914-r1.ebuild b/sci-chemistry/tm-align/tm-align-20150914-r1.ebuild new file mode 100644 index 000000000000..23c016c77a05 --- /dev/null +++ b/sci-chemistry/tm-align/tm-align-20150914-r1.ebuild @@ -0,0 +1,24 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +inherit cmake flag-o-matic fortran-2 + +DESCRIPTION="Quick & Accurate Structural Alignment" +HOMEPAGE="https://zhanggroup.org/TM-align/" +SRC_URI="http://zhanglab.ccmb.med.umich.edu/TM-align/TMtools${PV}.tar.gz" +S="${WORKDIR}" + +LICENSE="tm-align" +SLOT="0" +KEYWORDS="~amd64 ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux" +IUSE="custom-cflags" + +src_prepare() { + cp "${FILESDIR}"/CMakeLists.txt . || die + cmake_src_prepare + + # Recommended by upstream + use custom-cflags || replace-flags -O* -O3 && append-fflags -ffast-math +}