From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id F0065158F58 for ; Mon, 16 Aug 2021 20:48:22 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 2CD0AE0E1F; Mon, 16 Aug 2021 08:55:56 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id F3B56E0E1F for ; Mon, 16 Aug 2021 08:55:55 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 8E2853465DE for ; Mon, 16 Aug 2021 08:55:54 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 2E6FA7DE for ; Mon, 16 Aug 2021 08:55:53 +0000 (UTC) From: "Michał Górny" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Michał Górny" Message-ID: <1629104144.c8ccd39b41bebdd44b652b50f98cf9b469bbf078.mgorny@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: dev-python/pandas/ X-VCS-Repository: repo/gentoo X-VCS-Files: dev-python/pandas/Manifest dev-python/pandas/pandas-1.3.2.ebuild X-VCS-Directories: dev-python/pandas/ X-VCS-Committer: mgorny X-VCS-Committer-Name: Michał Górny X-VCS-Revision: c8ccd39b41bebdd44b652b50f98cf9b469bbf078 X-VCS-Branch: master Date: Mon, 16 Aug 2021 08:55:53 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 9bba0d59-b956-4ce4-9c44-a6172a426d40 X-Archives-Hash: 4ebea95df8c076a718f135a13d5a30eb commit: c8ccd39b41bebdd44b652b50f98cf9b469bbf078 Author: Michał Górny gentoo org> AuthorDate: Mon Aug 16 07:17:37 2021 +0000 Commit: Michał Górny gentoo org> CommitDate: Mon Aug 16 08:55:44 2021 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c8ccd39b dev-python/pandas: Bump to 1.3.2 Signed-off-by: Michał Górny gentoo.org> dev-python/pandas/Manifest | 1 + dev-python/pandas/pandas-1.3.2.ebuild | 192 ++++++++++++++++++++++++++++++++++ 2 files changed, 193 insertions(+) diff --git a/dev-python/pandas/Manifest b/dev-python/pandas/Manifest index ec290b6448b..14313c6e9da 100644 --- a/dev-python/pandas/Manifest +++ b/dev-python/pandas/Manifest @@ -3,3 +3,4 @@ DIST pandas-1.2.4.tar.gz 5469105 BLAKE2B 7f39e3ca67f5997c0668b0c2e9792869963adcd DIST pandas-1.2.5.tar.gz 5470907 BLAKE2B 2c5e0cb0849aa23ee8640528a3e29a579cc051543731e44c9be41fb989c85f1b2b18bc028e97c9b200f9894e4c3ac8af6a2100586e41f6d8a165a4c4679fd649 SHA512 c8bc2ca7ff8ca1a4877ccda67aaf49c103525d0f511636f93e1db3720d9a1717aacde0a5e3f107f8f620b59f0269d9e5c9515fbef46da4e87fca678d7acda990 DIST pandas-1.3.0.tar.gz 4721119 BLAKE2B f09eedd848686597a755da929683e841be61cce4385fa1e4616a328e267dcd4fb44bc9ad5da56402a52da6fb3b12f84795da10cd20df7fd0b349e749dd814bc3 SHA512 67145114091901d8e2a376392d8890372675a1b5831de310715a6e6f7f4509dd8cf1a4b30cab3314f849b6c709270a246524b958b686f9e7fbe2489ce5b650a0 DIST pandas-1.3.1.tar.gz 4724471 BLAKE2B 3c645927d25ba5cfd8f2822f07752149cc4a33c0b3b32d1f45986397b877b338a5287170281231058c37e2930152a6bd5f3f50fddf32805f05de49150abd6dd6 SHA512 ec57d123038cd4018dbfbe2da2d10211d507cdbaa849f4752c5770d017c55cf1d2c4b29f7c86e480695205e95622b28cd75319338644302732eb4ac9efef6993 +DIST pandas-1.3.2.tar.gz 4727155 BLAKE2B 0d667a70a4f45d47677af9d9f18ef5bcaad7d52fe780fa0646fbdcedaf426ef6a3ea768886b85a4051419d5965fe316c6162d770297e5dc679234ad99d22908b SHA512 5ba8b7c7f048e13f2493235b941ada34f9416777405fae4040688f88d004564aa6c8eddfb0dc5a78e97e8370a0293a75ba63704fea4e25bc5b003a619016a9c1 diff --git a/dev-python/pandas/pandas-1.3.2.ebuild b/dev-python/pandas/pandas-1.3.2.ebuild new file mode 100644 index 00000000000..5b4e933354c --- /dev/null +++ b/dev-python/pandas/pandas-1.3.2.ebuild @@ -0,0 +1,192 @@ +# Copyright 1999-2021 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{8..10} ) +PYTHON_REQ_USE="threads(+)" + +VIRTUALX_REQUIRED="manual" + +inherit distutils-r1 flag-o-matic multiprocessing optfeature virtualx + +DESCRIPTION="Powerful data structures for data analysis and statistics" +HOMEPAGE="https://pandas.pydata.org/ https://github.com/pandas-dev/pandas/" +SRC_URI=" + https://github.com/pandas-dev/pandas/releases/download/v${PV}/${P}.tar.gz" +S="${WORKDIR}/${P/_/}" + +SLOT="0" +LICENSE="BSD" +KEYWORDS="~amd64 ~arm ~arm64 ~riscv ~x86" +IUSE="doc full-support minimal test X" +RESTRICT="!test? ( test )" + +RECOMMENDED_DEPEND=" + >=dev-python/bottleneck-1.2.1[${PYTHON_USEDEP}] + >=dev-python/numexpr-2.7.0[${PYTHON_USEDEP}] +" + +# TODO: add pandas-gbq to the tree +OPTIONAL_DEPEND=" + dev-python/beautifulsoup:4[${PYTHON_USEDEP}] + dev-python/blosc[${PYTHON_USEDEP}] + || ( + dev-python/html5lib[${PYTHON_USEDEP}] + dev-python/lxml[${PYTHON_USEDEP}] + ) + dev-python/jinja[${PYTHON_USEDEP}] + dev-python/matplotlib[${PYTHON_USEDEP}] + || ( + dev-python/openpyxl[${PYTHON_USEDEP}] + dev-python/xlsxwriter[${PYTHON_USEDEP}] + ) + >=dev-python/pytables-3.2.1[${PYTHON_USEDEP}] + dev-python/statsmodels[${PYTHON_USEDEP}] + >=dev-python/xarray-0.12.3[${PYTHON_USEDEP}] + >=dev-python/sqlalchemy-1.3.0[${PYTHON_USEDEP}] + >=dev-python/xlrd-1.2.0[${PYTHON_USEDEP}] + >=dev-python/xlwt-1.3.0[${PYTHON_USEDEP}] + >=dev-python/scipy-1.1[${PYTHON_USEDEP}] + X? ( + || ( + dev-python/PyQt5[${PYTHON_USEDEP}] + x11-misc/xclip + x11-misc/xsel + ) + ) +" +COMMON_DEPEND=" + >=dev-python/numpy-1.17.3[${PYTHON_USEDEP}] + >=dev-python/python-dateutil-2.8.1-r3[${PYTHON_USEDEP}] + >=dev-python/pytz-2017.3[${PYTHON_USEDEP}] +" +DEPEND="${COMMON_DEPEND} + >=dev-python/cython-0.29.21[${PYTHON_USEDEP}] + doc? ( + ${VIRTUALX_DEPEND} + app-text/pandoc + dev-python/beautifulsoup:4[${PYTHON_USEDEP}] + dev-python/html5lib[${PYTHON_USEDEP}] + dev-python/ipython[${PYTHON_USEDEP}] + dev-python/lxml[${PYTHON_USEDEP}] + dev-python/matplotlib[${PYTHON_USEDEP}] + dev-python/nbsphinx[${PYTHON_USEDEP}] + >=dev-python/numpydoc-0.9.1[${PYTHON_USEDEP}] + >=dev-python/openpyxl-1.6.1[${PYTHON_USEDEP}] + >=dev-python/pytables-3.0.0[${PYTHON_USEDEP}] + dev-python/pytz[${PYTHON_USEDEP}] + dev-python/rpy[${PYTHON_USEDEP}] + dev-python/sphinx[${PYTHON_USEDEP}] + dev-python/xlrd[${PYTHON_USEDEP}] + dev-python/xlwt[${PYTHON_USEDEP}] + dev-python/scipy[${PYTHON_USEDEP}] + x11-misc/xclip + ) + test? ( + ${VIRTUALX_DEPEND} + ${RECOMMENDED_DEPEND} + ${OPTIONAL_DEPEND} + dev-python/beautifulsoup:4[${PYTHON_USEDEP}] + dev-python/hypothesis[${PYTHON_USEDEP}] + dev-python/openpyxl[${PYTHON_USEDEP}] + dev-python/pymysql[${PYTHON_USEDEP}] + >=dev-python/pytest-6[${PYTHON_USEDEP}] + dev-python/pytest-xdist[${PYTHON_USEDEP}] + dev-python/psycopg:2[${PYTHON_USEDEP}] + dev-python/xlsxwriter[${PYTHON_USEDEP}] + x11-misc/xclip + x11-misc/xsel + ) +" +# dev-python/statsmodels invokes a circular dep +# hence rm from doc? ( ), again +RDEPEND="${COMMON_DEPEND} + !minimal? ( ${RECOMMENDED_DEPEND} ) + full-support? ( ${OPTIONAL_DEPEND} ) +" + +python_prepare_all() { + # Prevent un-needed download during build + sed -e "/^ 'sphinx.ext.intersphinx',/d" \ + -i doc/source/conf.py || die + + # requires package installed + sed -e '/extra_compile_args =/s:"-Werror"::' \ + -i setup.py || die + + distutils-r1_python_prepare_all +} + +python_compile() { + distutils-r1_python_compile -j1 +} + +python_compile_all() { + # To build docs the need be located in $BUILD_DIR, + # else PYTHONPATH points to unusable modules. + if use doc; then + cd "${BUILD_DIR}"/lib || die + cp -ar "${S}"/doc . && cd doc || die + LANG=C PYTHONPATH=. virtx ${EPYTHON} make.py html + fi +} + +python_test() { + local deselect=( + # test for rounding errors, fails if we have better precision + # e.g. on amd64 with FMA or on arm64 + # https://github.com/pandas-dev/pandas/issues/38921 + pandas/tests/window/test_rolling.py::test_rolling_var_numerical_issues + + # weird issue, doesn't seem very important + 'pandas/tests/base/test_misc.py::test_memory_usage[series-with-empty-index]' + + # old psycopg2 API + pandas/tests/tools/test_to_datetime.py::TestToDatetime::test_to_datetime_tz_psycopg2 + + # Internet + pandas/tests/io/xml/test_xml.py::test_wrong_url + + # TODO: some data path problems? + pandas/tests/io/test_fsspec.py::test_read_csv + pandas/tests/io/test_fsspec.py::test_markdown_options + ) + + local -x LC_ALL=C.UTF-8 + pushd "${BUILD_DIR}"/lib > /dev/null || die + "${EPYTHON}" -c "import pandas; pandas.show_versions()" || die + PYTHONPATH=. virtx epytest pandas --skip-slow --skip-network \ + ${deselect[@]/#/--deselect } -m "not single" \ + -n "$(makeopts_jobs "${MAKEOPTS}" "$(get_nproc)")" + find . '(' -name .pytest_cache -o -name .hypothesis ')' \ + -exec rm -r {} + || die + popd > /dev/null || die +} + +python_install_all() { + if use doc; then + dodoc -r "${BUILD_DIR}"/lib/doc/build/html + einfo "An initial build of docs is absent of references to statsmodels" + einfo "due to circular dependency. To have them included, emerge" + einfo "statsmodels next and re-emerge pandas with USE doc" + fi + + distutils-r1_python_install_all +} + +pkg_postinst() { + optfeature "accelerating certain types of NaN evaluations, using specialized cython routines to achieve large speedups." dev-python/bottleneck + optfeature "accelerating certain numerical operations, using multiple cores as well as smart chunking and caching to achieve large speedups" ">=dev-python/numexpr-2.1" + optfeature "needed for pandas.io.html.read_html" dev-python/beautifulsoup:4 dev-python/html5lib dev-python/lxml + optfeature "for msgpack compression using blosc" dev-python/blosc + optfeature "Template engine for conditional HTML formatting" dev-python/jinja + optfeature "Plotting support" dev-python/matplotlib + optfeature "Needed for Excel I/O" ">=dev-python/openpyxl-3.0.0" dev-python/xlsxwriter dev-python/xlrd dev-python/xlwt + optfeature "necessary for HDF5-based storage" ">=dev-python/pytables-3.2.1" + optfeature "R I/O support" dev-python/rpy + optfeature "Needed for parts of pandas.stats" dev-python/statsmodels + optfeature "SQL database support" ">=dev-python/sqlalchemy-1.3.0" + optfeature "miscellaneous statistical functions" dev-python/scipy + optfeature "necessary to use pandas.io.clipboard.read_clipboard support" dev-python/PyQt5 dev-python/pygtk x11-misc/xclip x11-misc/xsel +}