From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 729411382C5 for ; Tue, 2 Mar 2021 14:14:05 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id B57A9E0D21; Tue, 2 Mar 2021 14:14:04 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 87F18E0D21 for ; Tue, 2 Mar 2021 14:14:04 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id E7DCC341183 for ; Tue, 2 Mar 2021 14:14:02 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 3546F46B for ; Tue, 2 Mar 2021 14:14:01 +0000 (UTC) From: "Michał Górny" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Michał Górny" Message-ID: <1614694438.943c4d44d3dab54de0cad6c83c03a3afef32f08a.mgorny@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: dev-python/pandas/ X-VCS-Repository: repo/gentoo X-VCS-Files: dev-python/pandas/Manifest dev-python/pandas/pandas-1.2.3.ebuild X-VCS-Directories: dev-python/pandas/ X-VCS-Committer: mgorny X-VCS-Committer-Name: Michał Górny X-VCS-Revision: 943c4d44d3dab54de0cad6c83c03a3afef32f08a X-VCS-Branch: master Date: Tue, 2 Mar 2021 14:14:01 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 1bb7a70a-8f36-4f00-b5d8-694806d3e448 X-Archives-Hash: 8008e0e9c5e0fbe814321c19c122407f commit: 943c4d44d3dab54de0cad6c83c03a3afef32f08a Author: Michał Górny gentoo org> AuthorDate: Tue Mar 2 13:03:55 2021 +0000 Commit: Michał Górny gentoo org> CommitDate: Tue Mar 2 14:13:58 2021 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=943c4d44 dev-python/pandas: Bump to 1.2.3 Signed-off-by: Michał Górny gentoo.org> dev-python/pandas/Manifest | 1 + dev-python/pandas/pandas-1.2.3.ebuild | 186 ++++++++++++++++++++++++++++++++++ 2 files changed, 187 insertions(+) diff --git a/dev-python/pandas/Manifest b/dev-python/pandas/Manifest index e20c78541e1..427b0bec894 100644 --- a/dev-python/pandas/Manifest +++ b/dev-python/pandas/Manifest @@ -1,3 +1,4 @@ DIST pandas-1.1.5.tar.gz 5229894 BLAKE2B 5b47774e33c7fccd7a9110e8971e8ce63cafd68273ee870b386aa8562be4c8f667137a4a078eafb2a62847bdd6f73c390254e8024d483c21e1834a8c49d44d32 SHA512 a213690ea658554b78e003a30cc88a59e34195457401d84b1cafdf74433ad27c801c12b8138371bb0206f6dc083ae882eabf0e33cb5733fa313e9f3257d48823 DIST pandas-1.2.1.tar.gz 5459053 BLAKE2B 49d99e7217d52f1233cdff20628da9028b7a8ce1d89a5ebe502c6e960ca9f7948005e7a63a15b76f9bc44ab5f15e00eef86c3b3179e6cad820e6f5072c7c78f0 SHA512 9bf9212ebdd07785f1877f5f80d6a5beb4637e8a1cf741e32a705a48724280a8e8daae209c66c1a3f00718b566127d77af578d6c72a5d9b68e2b03784c604083 DIST pandas-1.2.2.tar.gz 5463571 BLAKE2B e27e032bb9d6abb6f40d1a15bc7e9796690f0bd099e5fc7704cbd5b40b37c0f277b462116bd7582263abef8f728d3109f6c4c425cac427f0c750b019fd5e8ad8 SHA512 288ec9f3a2042c2a376340ddc25b4e2d9d3c4de146468316378269d4b70fb271241acb9aa5295415d8bebabad859a9ea9dc95aa71a68f06c2eba73809b9b30e2 +DIST pandas-1.2.3.tar.gz 5466356 BLAKE2B f392321915128769814b3a8b7673cd7b00c9c292f4cb8d8b2e8537f7cc513f92cb6b8ff74dffe3b167987e8fa387738264dbebfdf4019f9cd7afd4f78234212a SHA512 3108424253aa143a85ef166091829bbd8c9b6446b516f37252742146d184f722e1fb8af5b4d04937362a298068019a91392e40c818126df6a7459bab7f3077cb diff --git a/dev-python/pandas/pandas-1.2.3.ebuild b/dev-python/pandas/pandas-1.2.3.ebuild new file mode 100644 index 00000000000..2bfbf0f7609 --- /dev/null +++ b/dev-python/pandas/pandas-1.2.3.ebuild @@ -0,0 +1,186 @@ +# Copyright 1999-2021 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 + +PYTHON_COMPAT=( python3_{7..9} ) +PYTHON_REQ_USE="threads(+)" + +VIRTUALX_REQUIRED="manual" + +inherit distutils-r1 flag-o-matic multiprocessing optfeature virtualx + +DESCRIPTION="Powerful data structures for data analysis and statistics" +HOMEPAGE="https://pandas.pydata.org/" +SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P/_/}.tar.gz" +S="${WORKDIR}/${P/_/}" + +SLOT="0" +LICENSE="BSD" +KEYWORDS="~amd64 ~arm ~arm64 ~x86" +IUSE="doc full-support minimal test X" +RESTRICT="!test? ( test )" + +RECOMMENDED_DEPEND=" + >=dev-python/bottleneck-1.2.1[${PYTHON_USEDEP}] + >=dev-python/numexpr-2.1[${PYTHON_USEDEP}] +" + +# TODO: add pandas-gbq to the tree +OPTIONAL_DEPEND=" + dev-python/beautifulsoup:4[${PYTHON_USEDEP}] + dev-python/blosc[${PYTHON_USEDEP}] + || ( + dev-python/html5lib[${PYTHON_USEDEP}] + dev-python/lxml[${PYTHON_USEDEP}] + ) + dev-python/jinja[${PYTHON_USEDEP}] + dev-python/matplotlib[${PYTHON_USEDEP}] + || ( + dev-python/openpyxl[${PYTHON_USEDEP}] + dev-python/xlsxwriter[${PYTHON_USEDEP}] + ) + >=dev-python/pytables-3.2.1[${PYTHON_USEDEP}] + dev-python/statsmodels[${PYTHON_USEDEP}] + $(python_gen_cond_dep ' + >=dev-python/xarray-0.10.8[${PYTHON_USEDEP}] + ' python3_{6,7}) + >=dev-python/sqlalchemy-0.8.1[${PYTHON_USEDEP}] + >=dev-python/xlrd-1.0.0[${PYTHON_USEDEP}] + dev-python/xlwt[${PYTHON_USEDEP}] + >=dev-python/scipy-1.1[${PYTHON_USEDEP}] + X? ( + || ( + dev-python/PyQt5[${PYTHON_USEDEP}] + x11-misc/xclip + x11-misc/xsel + ) + ) +" +COMMON_DEPEND=" + >dev-python/numpy-1.15.4[${PYTHON_USEDEP}] + dev-python/python-dateutil[${PYTHON_USEDEP}] + dev-python/pytz[${PYTHON_USEDEP}] +" +DEPEND="${COMMON_DEPEND} + >=dev-python/cython-0.29.21[${PYTHON_USEDEP}] + doc? ( + ${VIRTUALX_DEPEND} + app-text/pandoc + dev-python/beautifulsoup:4[${PYTHON_USEDEP}] + dev-python/html5lib[${PYTHON_USEDEP}] + dev-python/ipython[${PYTHON_USEDEP}] + dev-python/lxml[${PYTHON_USEDEP}] + dev-python/matplotlib[${PYTHON_USEDEP}] + dev-python/nbsphinx[${PYTHON_USEDEP}] + >=dev-python/numpydoc-0.9.1[${PYTHON_USEDEP}] + >=dev-python/openpyxl-1.6.1[${PYTHON_USEDEP}] + >=dev-python/pytables-3.0.0[${PYTHON_USEDEP}] + dev-python/pytz[${PYTHON_USEDEP}] + dev-python/rpy[${PYTHON_USEDEP}] + dev-python/sphinx[${PYTHON_USEDEP}] + dev-python/xlrd[${PYTHON_USEDEP}] + dev-python/xlwt[${PYTHON_USEDEP}] + dev-python/scipy[${PYTHON_USEDEP}] + x11-misc/xclip + ) + test? ( + ${VIRTUALX_DEPEND} + ${RECOMMENDED_DEPEND} + ${OPTIONAL_DEPEND} + dev-python/beautifulsoup:4[${PYTHON_USEDEP}] + dev-python/hypothesis[${PYTHON_USEDEP}] + dev-python/nose[${PYTHON_USEDEP}] + dev-python/openpyxl[${PYTHON_USEDEP}] + dev-python/pymysql[${PYTHON_USEDEP}] + >=dev-python/pytest-5.1[${PYTHON_USEDEP}] + dev-python/pytest-mock[${PYTHON_USEDEP}] + dev-python/pytest-xdist[${PYTHON_USEDEP}] + dev-python/psycopg:2[${PYTHON_USEDEP}] + dev-python/xlsxwriter[${PYTHON_USEDEP}] + x11-misc/xclip + x11-misc/xsel + ) +" +# dev-python/statsmodels invokes a circular dep +# hence rm from doc? ( ), again +RDEPEND="${COMMON_DEPEND} + !minimal? ( ${RECOMMENDED_DEPEND} ) + full-support? ( ${OPTIONAL_DEPEND} ) +" + +python_prepare_all() { + # Prevent un-needed download during build + sed -e "/^ 'sphinx.ext.intersphinx',/d" \ + -i doc/source/conf.py || die + + # requires package installed + sed -e '/extra_compile_args =/s:"-Werror"::' \ + -i setup.py || die + + distutils-r1_python_prepare_all +} + +python_compile_all() { + # To build docs the need be located in $BUILD_DIR, + # else PYTHONPATH points to unusable modules. + if use doc; then + cd "${BUILD_DIR}"/lib || die + cp -ar "${S}"/doc . && cd doc || die + LANG=C PYTHONPATH=. virtx ${EPYTHON} make.py html + fi +} + +src_test() { + virtx distutils-r1_src_test +} + +python_test() { + local deselect=( + # broken on practically any hardware/CFLAGS but the one + # the patch author was using + # https://github.com/pandas-dev/pandas/issues/38921 + pandas/tests/window/test_rolling.py::test_rolling_var_numerical_issues + + # weird issue, doesn't seem very important + 'pandas/tests/base/test_misc.py::test_memory_usage[series-with-empty-index]' + ) + + local -x LC_ALL=C.UTF-8 + pushd "${BUILD_DIR}"/lib > /dev/null || die + "${EPYTHON}" -c "import pandas; pandas.show_versions()" || die + PYTHONPATH=. pytest pandas -vv --skip-slow --skip-network \ + ${deselect[@]/#/--deselect } \ + -n "$(makeopts_jobs "${MAKEOPTS}" "$(get_nproc)")" \ + -m "not single" || die "Tests failed with ${EPYTHON}" + find . '(' -name .pytest_cache -o -name .hypothesis ')' \ + -exec rm -r {} + || die + popd > /dev/null || die +} + +python_install_all() { + if use doc; then + dodoc -r "${BUILD_DIR}"/lib/doc/build/html + einfo "An initial build of docs is absent of references to statsmodels" + einfo "due to circular dependency. To have them included, emerge" + einfo "statsmodels next and re-emerge pandas with USE doc" + fi + + distutils-r1_python_install_all +} + +pkg_postinst() { + optfeature "accelerating certain types of NaN evaluations, using specialized cython routines to achieve large speedups." dev-python/bottleneck + optfeature "accelerating certain numerical operations, using multiple cores as well as smart chunking and caching to achieve large speedups" ">=dev-python/numexpr-2.1" + optfeature "needed for pandas.io.html.read_html" dev-python/beautifulsoup:4 dev-python/html5lib dev-python/lxml + optfeature "for msgpack compression using blosc" dev-python/blosc + optfeature "Template engine for conditional HTML formatting" dev-python/jinja + optfeature "Plotting support" dev-python/matplotlib + optfeature "Needed for Excel I/O" ">=dev-python/openpyxl-1.6.1" dev-python/xlsxwriter dev-python/xlrd dev-python/xlwt + optfeature "necessary for HDF5-based storage" ">=dev-python/pytables-3.2.1" + optfeature "R I/O support" dev-python/rpy + optfeature "Needed for parts of pandas.stats" dev-python/statsmodels + optfeature "SQL database support" ">=dev-python/sqlalchemy-0.8.1" + optfeature "miscellaneous statistical functions" dev-python/scipy + optfeature "necessary to use pandas.io.clipboard.read_clipboard support" dev-python/PyQt5 dev-python/pygtk x11-misc/xclip x11-misc/xsel +}