* [gentoo-commits] proj/sci:master commit in: sci-chemistry/mics/
2013-06-18 8:54 [gentoo-commits] proj/sci:fixing " Justin Lecher
@ 2013-06-18 8:56 ` Justin Lecher
0 siblings, 0 replies; 5+ messages in thread
From: Justin Lecher @ 2013-06-18 8:56 UTC (permalink / raw
To: gentoo-commits
commit: 15dc321b9c4a6173f566bbc8f60ff1b10b3e241f
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Tue Jun 18 08:54:00 2013 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Tue Jun 18 08:54:00 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=15dc321b
sci-chemistry/mics: New package
Package-Manager: portage-2.2.0_alpha180
---
sci-chemistry/mics/ChangeLog | 10 +++++
sci-chemistry/mics/metadata.xml | 5 +++
sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild | 51 ++++++++++++++++++++++
3 files changed, 66 insertions(+)
diff --git a/sci-chemistry/mics/ChangeLog b/sci-chemistry/mics/ChangeLog
new file mode 100644
index 0000000..0ca4c98
--- /dev/null
+++ b/sci-chemistry/mics/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-chemistry/mics
+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*mics-1.00.2011.327.12.00 (18 Jun 2013)
+
+ 18 Jun 2013; Justin Lecher <jlec@gentoo.org>
+ +mics-1.00.2011.327.12.00.ebuild, +metadata.xml:
+ New package
+
diff --git a/sci-chemistry/mics/metadata.xml b/sci-chemistry/mics/metadata.xml
new file mode 100644
index 0000000..51fdeda
--- /dev/null
+++ b/sci-chemistry/mics/metadata.xml
@@ -0,0 +1,5 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <herd>sci-chemistry</herd>
+</pkgmetadata>
diff --git a/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild b/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild
new file mode 100644
index 0000000..5f86a08
--- /dev/null
+++ b/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild
@@ -0,0 +1,51 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+inherit java-pkg-opt-2
+
+DESCRIPTION="Prediction of Protein Structural Motifs from NMR Chemical Shifts"
+HOMEPAGE="http://spin.niddk.nih.gov/bax/software/MICS/"
+SRC_URI="http://spin.niddk.nih.gov/bax/software/MICS/mics.tar.Z -> ${P}.tgz"
+
+SLOT="0"
+LICENSE="all-rights-reserved"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="examples"
+
+RDEPEND=">=virtual/jre-1.5"
+DEPEND="${RDEPEND}"
+
+S="${WORKDIR}"/MICS
+
+QA_PREBUILT="/opt/.*"
+
+src_prepare() {
+ rm -f bin/MICS.{mac,static.*,exe} || die
+}
+
+src_install() {
+ local MICS="/opt/${PN}"
+ exeinto /opt/bin
+ newexe bin/MICS* ${PN}
+
+ insinto ${MICS}
+ doins -r tab
+
+ java-pkg_jarinto ${MICS}
+ java-pkg_dojar bin/rama.jar
+
+ java-pkg_dolauncher jrama+ --jar rama.jar -into /opt/
+
+ if use examples; then
+ insinto /usr/share/${PN}
+ doins -r demo
+ fi
+
+ cat >> "${T}"/40MICS <<- EOF
+ MICS_DIR="${EPREFIX}/${MICS}"
+ EOF
+ doenvd "${T}"/40MICS
+}
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-chemistry/mics/
@ 2013-06-18 9:07 Justin Lecher
0 siblings, 0 replies; 5+ messages in thread
From: Justin Lecher @ 2013-06-18 9:07 UTC (permalink / raw
To: gentoo-commits
commit: 4e6c9699879f9b618a8ea9702f5e256da715eb82
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Tue Jun 18 08:54:00 2013 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Tue Jun 18 09:05:22 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=4e6c9699
sci-chemistry/mics: New package
Package-Manager: portage-2.2.0_alpha180
---
sci-chemistry/mics/ChangeLog | 10 +++++
sci-chemistry/mics/metadata.xml | 5 +++
sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild | 51 ++++++++++++++++++++++
3 files changed, 66 insertions(+)
diff --git a/sci-chemistry/mics/ChangeLog b/sci-chemistry/mics/ChangeLog
new file mode 100644
index 0000000..0ca4c98
--- /dev/null
+++ b/sci-chemistry/mics/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-chemistry/mics
+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*mics-1.00.2011.327.12.00 (18 Jun 2013)
+
+ 18 Jun 2013; Justin Lecher <jlec@gentoo.org>
+ +mics-1.00.2011.327.12.00.ebuild, +metadata.xml:
+ New package
+
diff --git a/sci-chemistry/mics/metadata.xml b/sci-chemistry/mics/metadata.xml
new file mode 100644
index 0000000..51fdeda
--- /dev/null
+++ b/sci-chemistry/mics/metadata.xml
@@ -0,0 +1,5 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <herd>sci-chemistry</herd>
+</pkgmetadata>
diff --git a/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild b/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild
new file mode 100644
index 0000000..5f86a08
--- /dev/null
+++ b/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild
@@ -0,0 +1,51 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+inherit java-pkg-opt-2
+
+DESCRIPTION="Prediction of Protein Structural Motifs from NMR Chemical Shifts"
+HOMEPAGE="http://spin.niddk.nih.gov/bax/software/MICS/"
+SRC_URI="http://spin.niddk.nih.gov/bax/software/MICS/mics.tar.Z -> ${P}.tgz"
+
+SLOT="0"
+LICENSE="all-rights-reserved"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="examples"
+
+RDEPEND=">=virtual/jre-1.5"
+DEPEND="${RDEPEND}"
+
+S="${WORKDIR}"/MICS
+
+QA_PREBUILT="/opt/.*"
+
+src_prepare() {
+ rm -f bin/MICS.{mac,static.*,exe} || die
+}
+
+src_install() {
+ local MICS="/opt/${PN}"
+ exeinto /opt/bin
+ newexe bin/MICS* ${PN}
+
+ insinto ${MICS}
+ doins -r tab
+
+ java-pkg_jarinto ${MICS}
+ java-pkg_dojar bin/rama.jar
+
+ java-pkg_dolauncher jrama+ --jar rama.jar -into /opt/
+
+ if use examples; then
+ insinto /usr/share/${PN}
+ doins -r demo
+ fi
+
+ cat >> "${T}"/40MICS <<- EOF
+ MICS_DIR="${EPREFIX}/${MICS}"
+ EOF
+ doenvd "${T}"/40MICS
+}
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-chemistry/mics/
@ 2015-09-21 17:44 Justin Lecher
0 siblings, 0 replies; 5+ messages in thread
From: Justin Lecher @ 2015-09-21 17:44 UTC (permalink / raw
To: gentoo-commits
commit: e2f47ebdce65fa50e956a981e9047577a68f6af7
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Mon Sep 21 17:25:28 2015 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Mon Sep 21 17:25:28 2015 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=e2f47ebd
sci-chemistry/mics: Add subslot operators
Package-Manager: portage-2.2.20.1
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild b/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild
index b0a025b..d7eae9c 100644
--- a/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild
+++ b/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
@@ -15,7 +15,7 @@ LICENSE="all-rights-reserved"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="examples"
-RDEPEND=">=virtual/jre-1.5"
+RDEPEND=">=virtual/jre-1.5:*"
DEPEND="${RDEPEND}"
S="${WORKDIR}"/MICS
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-chemistry/mics/
@ 2021-02-05 11:51 Andrew Ammerlaan
0 siblings, 0 replies; 5+ messages in thread
From: Andrew Ammerlaan @ 2021-02-05 11:51 UTC (permalink / raw
To: gentoo-commits
commit: 05b4c212ff74037560d5a8f99a075b26676f1000
Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Fri Feb 5 11:40:30 2021 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Fri Feb 5 11:40:30 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=05b4c212
sci-chemistry/mics: use https
Package-Manager: Portage-3.0.14, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild b/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild
index 41d7ca76b..be1d47c95 100644
--- a/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild
+++ b/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=5
@@ -6,8 +6,8 @@ EAPI=5
inherit java-pkg-opt-2
DESCRIPTION="Prediction of Protein Structural Motifs from NMR Chemical Shifts"
-HOMEPAGE="http://spin.niddk.nih.gov/bax/software/MICS/"
-SRC_URI="http://spin.niddk.nih.gov/bax/software/MICS/mics.tar.Z -> ${P}.tgz"
+HOMEPAGE="https://spin.niddk.nih.gov/bax/software/MICS/"
+SRC_URI="https://spin.niddk.nih.gov/bax/software/MICS/mics.tar.Z -> ${P}.tgz"
SLOT="0"
LICENSE="all-rights-reserved"
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-chemistry/mics/
@ 2021-03-05 8:30 Andrew Ammerlaan
0 siblings, 0 replies; 5+ messages in thread
From: Andrew Ammerlaan @ 2021-03-05 8:30 UTC (permalink / raw
To: gentoo-commits
commit: 80330105b70415b35bbe1ec152c9464f9aea3fce
Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Fri Mar 5 08:24:02 2021 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Fri Mar 5 08:24:02 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=80330105
sci-chemistry/mics: EAPI bump
Package-Manager: Portage-3.0.16, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild | 5 +++--
1 file changed, 3 insertions(+), 2 deletions(-)
diff --git a/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild b/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild
index be1d47c95..5be82db7b 100644
--- a/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild
+++ b/sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild
@@ -1,7 +1,7 @@
# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=5
+EAPI=7
inherit java-pkg-opt-2
@@ -17,11 +17,12 @@ IUSE="examples"
RDEPEND=">=virtual/jre-1.5:*"
DEPEND="${RDEPEND}"
-S="${WORKDIR}"/MICS
+S="${WORKDIR}/MICS"
QA_PREBUILT="/opt/.*"
src_prepare() {
+ default
rm -f bin/MICS.{mac,static.*,exe} || die
}
^ permalink raw reply related [flat|nested] 5+ messages in thread
end of thread, other threads:[~2021-03-05 8:30 UTC | newest]
Thread overview: 5+ messages (download: mbox.gz follow: Atom feed
-- links below jump to the message on this page --
2021-02-05 11:51 [gentoo-commits] proj/sci:master commit in: sci-chemistry/mics/ Andrew Ammerlaan
-- strict thread matches above, loose matches on Subject: below --
2021-03-05 8:30 Andrew Ammerlaan
2015-09-21 17:44 Justin Lecher
2013-06-18 9:07 Justin Lecher
2013-06-18 8:54 [gentoo-commits] proj/sci:fixing " Justin Lecher
2013-06-18 8:56 ` [gentoo-commits] proj/sci:master " Justin Lecher
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox