[gentoo-commits] proj/sci:master commit in: sci-biology/eval/

["Andrew Ammerlaan" <andrewammerlaan@riseup.net>]

commit:     ea4f3085d2e5a027085bb889f42a7e22cdc3b887
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Tue Jan 19 14:10:31 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Tue Jan 19 14:10:31 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=ea4f3085

sci-biology/eval: remove pack, does not fetch, invalid cert

Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 sci-biology/eval/eval-2.2.8.ebuild | 48 --------------------------------------
 sci-biology/eval/metadata.xml      | 12 ----------
 2 files changed, 60 deletions(-)

diff --git a/sci-biology/eval/eval-2.2.8.ebuild b/sci-biology/eval/eval-2.2.8.ebuild
deleted file mode 100644
index 074f39707..000000000
--- a/sci-biology/eval/eval-2.2.8.ebuild
+++ /dev/null
@@ -1,48 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-PERL_EXPORT_PHASE_FUNCTIONS=no
-inherit perl-module eutils python-r1 toolchain-funcs
-
-DESCRIPTION="Validate, compare and draw summary statistics for GTF files"
-HOMEPAGE="http://mblab.wustl.edu/software.html"
-SRC_URI="
-	http://mblab.wustl.edu/software/download/${PN}-${PV}.tar.gz
-	http://mblab.wustl.edu/software/download/eval-documentation.pdf"
-
-LICENSE="GPL-2+"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-DEPEND="${PYTHON_DEPS}
-	dev-lang/tk:0=
-	sci-biology/vcftools
-	sci-visualization/gnuplot"
-RDEPEND="${DEPEND}"
-
-src_install(){
-	dobin *.pl
-	# TODO: prepend shebang lines to *.py files
-	# https://bugs.gentoo.org/show_bug.cgi?id=602580
-	sed -i -e "1i #!/usr/bin/env python" RangeFinder.py || die
-	python_foreach_impl python_doscript *.py
-	dodoc \
-		"${DISTDIR}"/eval-documentation.pdf \
-		help/*.ps
-	insinto /usr/share/${PN}
-	doins *.gtf
-	perl_set_version
-	insinto ${VENDOR_LIB}
-	doins *.pm
-}
-
-pkg_postinst(){
-	ewarn "The version of validate_gtf.pl bundled with eval differs a bit from"
-	ewarn "validate_gtf-1.0.pl from http://mblab.wustl.edu/software.html#validategtf"
-}

diff --git a/sci-biology/eval/metadata.xml b/sci-biology/eval/metadata.xml
deleted file mode 100644
index 138cb7705..000000000
--- a/sci-biology/eval/metadata.xml
+++ /dev/null
@@ -1,12 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="person">
-		<email>mmokrejs@fold.natur.cuni.cz</email>
-		<name>Martin Mokrejs</name>
-	</maintainer>
-	<maintainer type="project">
-		<email>sci-biology@gentoo.org</email>
-		<name>Gentoo Biology Project</name>
-	</maintainer>
-</pkgmetadata>