* [gentoo-commits] proj/sci:master commit in: dev-python/dnaio/
@ 2020-09-22 14:15 Aisha Tammy
0 siblings, 0 replies; 6+ messages in thread
From: Aisha Tammy @ 2020-09-22 14:15 UTC (permalink / raw
To: gentoo-commits
commit: 151c5a991dc9f30e3462abcaf6fa6f70b4dfad44
Author: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Tue Sep 22 00:16:04 2020 +0000
Commit: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Tue Sep 22 14:11:41 2020 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=151c5a99
dev-python/dnaio: dependency for cutadapt
fast reader for FASTA FASTQ files
Package-Manager: Portage-3.0.7, Repoman-3.0.1
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>
dev-python/dnaio/dnaio-0.4.2.ebuild | 20 ++++++++++++++++++++
dev-python/dnaio/metadata.xml | 12 ++++++++++++
2 files changed, 32 insertions(+)
diff --git a/dev-python/dnaio/dnaio-0.4.2.ebuild b/dev-python/dnaio/dnaio-0.4.2.ebuild
new file mode 100644
index 000000000..18c372450
--- /dev/null
+++ b/dev-python/dnaio/dnaio-0.4.2.ebuild
@@ -0,0 +1,20 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{6..9} )
+inherit distutils-r1
+
+DESCRIPTION="efficient reader for FASTA and FASTQ files"
+HOMEPAGE="https://pypi.python.org/pypi/xopen"
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="
+ ${PYTHON_DEPS}
+ dev-python/xopen
+"
diff --git a/dev-python/dnaio/metadata.xml b/dev-python/dnaio/metadata.xml
new file mode 100644
index 000000000..e97c4322a
--- /dev/null
+++ b/dev-python/dnaio/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <maintainer type="person">
+ <email>gentoo@aisha.cc</email>
+ <name>Aisha Tammy</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+</pkgmetadata>
^ permalink raw reply related [flat|nested] 6+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/dnaio/
@ 2020-09-27 23:02 Aisha Tammy
0 siblings, 0 replies; 6+ messages in thread
From: Aisha Tammy @ 2020-09-27 23:02 UTC (permalink / raw
To: gentoo-commits
commit: 26a6561ed3947a5427c4d1639d9d6d3ac8c4ae9a
Author: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Sun Sep 27 22:40:12 2020 +0000
Commit: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Sun Sep 27 23:02:00 2020 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=26a6561e
dev-python/dnaio: explain no tests
Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>
dev-python/dnaio/dnaio-0.4.2.ebuild | 2 ++
1 file changed, 2 insertions(+)
diff --git a/dev-python/dnaio/dnaio-0.4.2.ebuild b/dev-python/dnaio/dnaio-0.4.2.ebuild
index 18c372450..73615c246 100644
--- a/dev-python/dnaio/dnaio-0.4.2.ebuild
+++ b/dev-python/dnaio/dnaio-0.4.2.ebuild
@@ -18,3 +18,5 @@ RDEPEND="
${PYTHON_DEPS}
dev-python/xopen
"
+
+# no tests in package
^ permalink raw reply related [flat|nested] 6+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/dnaio/
@ 2020-11-08 16:25 Aisha Tammy
0 siblings, 0 replies; 6+ messages in thread
From: Aisha Tammy @ 2020-11-08 16:25 UTC (permalink / raw
To: gentoo-commits
commit: e00b4faa41df701e9072db63491ebd080e080006
Author: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Sun Nov 8 16:25:43 2020 +0000
Commit: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Sun Nov 8 16:25:53 2020 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=e00b4faa
dev-python/dnaio: version bump to 0.4.3
Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>
dev-python/dnaio/dnaio-0.4.3.ebuild | 22 ++++++++++++++++++++++
1 file changed, 22 insertions(+)
diff --git a/dev-python/dnaio/dnaio-0.4.3.ebuild b/dev-python/dnaio/dnaio-0.4.3.ebuild
new file mode 100644
index 000000000..73615c246
--- /dev/null
+++ b/dev-python/dnaio/dnaio-0.4.3.ebuild
@@ -0,0 +1,22 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{6..9} )
+inherit distutils-r1
+
+DESCRIPTION="efficient reader for FASTA and FASTQ files"
+HOMEPAGE="https://pypi.python.org/pypi/xopen"
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="
+ ${PYTHON_DEPS}
+ dev-python/xopen
+"
+
+# no tests in package
^ permalink raw reply related [flat|nested] 6+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/dnaio/
@ 2020-12-23 2:52 Aisha Tammy
0 siblings, 0 replies; 6+ messages in thread
From: Aisha Tammy @ 2020-12-23 2:52 UTC (permalink / raw
To: gentoo-commits
commit: 2f73e76cad9eeff44eba8b34aad6276c280d3baa
Author: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Wed Dec 23 02:52:32 2020 +0000
Commit: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Wed Dec 23 02:52:32 2020 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=2f73e76c
dev-python/dnaio: version bump to 0.5.0
Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>
dev-python/dnaio/dnaio-0.5.0.ebuild | 22 ++++++++++++++++++++++
1 file changed, 22 insertions(+)
diff --git a/dev-python/dnaio/dnaio-0.5.0.ebuild b/dev-python/dnaio/dnaio-0.5.0.ebuild
new file mode 100644
index 000000000..73615c246
--- /dev/null
+++ b/dev-python/dnaio/dnaio-0.5.0.ebuild
@@ -0,0 +1,22 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{6..9} )
+inherit distutils-r1
+
+DESCRIPTION="efficient reader for FASTA and FASTQ files"
+HOMEPAGE="https://pypi.python.org/pypi/xopen"
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="
+ ${PYTHON_DEPS}
+ dev-python/xopen
+"
+
+# no tests in package
^ permalink raw reply related [flat|nested] 6+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/dnaio/
@ 2021-05-20 21:42 Aisha Tammy
0 siblings, 0 replies; 6+ messages in thread
From: Aisha Tammy @ 2021-05-20 21:42 UTC (permalink / raw
To: gentoo-commits
commit: bd45a75cb1ba4c088b79d53981d44eeaa45f9582
Author: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Thu May 20 21:42:36 2021 +0000
Commit: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Thu May 20 21:42:36 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=bd45a75c
dev-python/dnaio: version bump to 0.5.1
Package-Manager: Portage-3.0.18, Repoman-3.0.3
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>
dev-python/dnaio/dnaio-0.5.1.ebuild | 22 ++++++++++++++++++++++
1 file changed, 22 insertions(+)
diff --git a/dev-python/dnaio/dnaio-0.5.1.ebuild b/dev-python/dnaio/dnaio-0.5.1.ebuild
new file mode 100644
index 000000000..2a7885b90
--- /dev/null
+++ b/dev-python/dnaio/dnaio-0.5.1.ebuild
@@ -0,0 +1,22 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{7..9} )
+inherit distutils-r1
+
+DESCRIPTION="efficient reader for FASTA and FASTQ files"
+HOMEPAGE="https://pypi.python.org/pypi/xopen"
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="
+ ${PYTHON_DEPS}
+ dev-python/xopen
+"
+
+# no tests in package
^ permalink raw reply related [flat|nested] 6+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/dnaio/
@ 2024-09-29 13:33 Alexey Shvetsov
0 siblings, 0 replies; 6+ messages in thread
From: Alexey Shvetsov @ 2024-09-29 13:33 UTC (permalink / raw
To: gentoo-commits
commit: 421ae19c6a1e8b7c8f2d42990d9a951d1e4aa0a2
Author: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Sun Sep 29 13:26:44 2024 +0000
Commit: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Sun Sep 29 13:33:30 2024 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=421ae19c
dev-python/dnaio: new package, add 1.2.1
Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>
dev-python/dnaio/dnaio-1.2.1.ebuild | 27 +++++++++++++++++++++++++++
dev-python/dnaio/metadata.xml | 12 ++++++++++++
2 files changed, 39 insertions(+)
diff --git a/dev-python/dnaio/dnaio-1.2.1.ebuild b/dev-python/dnaio/dnaio-1.2.1.ebuild
new file mode 100644
index 000000000..63e3d4201
--- /dev/null
+++ b/dev-python/dnaio/dnaio-1.2.1.ebuild
@@ -0,0 +1,27 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{10..13} )
+DISTUTILS_USE_PEP517=setuptools
+
+inherit distutils-r1 pypi
+
+DESCRIPTION="dnaio processes FASTQ, FASTA and uBAM files"
+HOMEPAGE="https://github.com/marcelm/dnaio/"
+SRC_URI="$(pypi_sdist_url "${PN^}" "${PV}")"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64"
+
+IUSE="test"
+DEPEND="
+ dev-python/xopen[${PYTHON_USEDEP}]
+"
+RDEPEND="
+ ${DEPEND}
+ test? ( dev-python/pytest )
+"
+distutils_enable_tests pytest
diff --git a/dev-python/dnaio/metadata.xml b/dev-python/dnaio/metadata.xml
new file mode 100644
index 000000000..7151605a5
--- /dev/null
+++ b/dev-python/dnaio/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8'?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="pypi">DNAio</remote-id>
+ <remote-id type="github">marcelm/dnaio</remote-id>
+ </upstream>
+</pkgmetadata>
^ permalink raw reply related [flat|nested] 6+ messages in thread
end of thread, other threads:[~2024-09-29 13:33 UTC | newest]
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