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From: "Mikle Kolyada" <zlogene@gentoo.org>
To: gentoo-commits@lists.gentoo.org
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Subject: [gentoo-commits] repo/gentoo:master commit in: sys-cluster/openmpi/
X-VCS-Repository: repo/gentoo
X-VCS-Files: sys-cluster/openmpi/Manifest sys-cluster/openmpi/openmpi-4.0.4.ebuild
X-VCS-Directories: sys-cluster/openmpi/
X-VCS-Committer: zlogene
X-VCS-Committer-Name: Mikle Kolyada
X-VCS-Revision: 9a1fb32e9d3c56390100129b03af7a3bc085e7f7
X-VCS-Branch: master
Date: Thu, 30 Jul 2020 08:29:50 +0000 (UTC)
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commit: 9a1fb32e9d3c56390100129b03af7a3bc085e7f7
Author: Mikle Kolyada <zlogene <AT> gentoo <DOT> org>
AuthorDate: Thu Jul 30 08:29:16 2020 +0000
Commit: Mikle Kolyada <zlogene <AT> gentoo <DOT> org>
CommitDate: Thu Jul 30 08:29:46 2020 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9a1fb32e
sys-cluster/openmpi: Version bump (v4.0.4)
Package-Manager: Portage-2.3.103, Repoman-2.3.23
Signed-off-by: Mikle Kolyada <zlogene <AT> gentoo.org>
sys-cluster/openmpi/Manifest | 1 +
sys-cluster/openmpi/openmpi-4.0.4.ebuild | 166 +++++++++++++++++++++++++++++++
2 files changed, 167 insertions(+)
diff --git a/sys-cluster/openmpi/Manifest b/sys-cluster/openmpi/Manifest
index 0950a20cab9..97fe13c0bcb 100644
--- a/sys-cluster/openmpi/Manifest
+++ b/sys-cluster/openmpi/Manifest
@@ -9,3 +9,4 @@ DIST openmpi-3.0.4.tar.bz2 9308341 BLAKE2B 84536082f8415c9a0e41db01d96d64bffc463
DIST openmpi-3.1.4.tar.bz2 9468371 BLAKE2B 70a93aa170086f43b2eb4f9b7c74673065bd309ae7a4c8f478a6db7523167fd1d25af19f87661149f6dd6033898ab47b86690a0421a01aa6f5a4d70478072e0e SHA512 5b4aafffc79fd85cb94a11a6e2fac563b142ac532191009eb35826c432ed3c391a6616e2ca92eacbf36137468eadb7c0f7ddc787034bc95c4214232ed5128338
DIST openmpi-4.0.2.tar.bz2 9819372 BLAKE2B 000faa8ff032f9aa6bf5f0a14fb9a363080cfcdd7c6f8ab90bc9507fd7a473d70502574ee1e75c88acecb06c516a643ef7b9e804fb580be9fc860b7b1fb1cc5d SHA512 634d45d989f1e0b8848bfb4eb4527c7edd76d4fccd77a5f8d85a46a5822f97ba653adf13df857c87ae56a8117b4ae2d45ec24249c6ee41a562446d4112ddb770
DIST openmpi-4.0.3.tar.bz2 9856669 BLAKE2B 571e8038cdf125bfb452fbee44d8397f8e724498971409fb25e11cc90ad4d7f9106f4ad093d4722754303808b82c58bf3b39a72a2567192efd1b98422f09160f SHA512 01f773064c575a0fe6ab081c20c5cf07ba1c9eada5ecfe520d14ce2b9fc6d021d0f56a0159fa354fd6c8e2bb7354a272aa8d0063b351f59251deb56474849acc
+DIST openmpi-4.0.4.tar.bz2 9748444 BLAKE2B 3c3258b7cd71156deec317479ac1ea9766b09447b77174e448a63dab30f75a525c4142159ff58ad0b6208282e36d568e4cd4e7cc1f8b9b34cad8561ce2969a72 SHA512 6c193b4b5cbfd9d48fa5efcef01372c424b51ae5e9727ccf4235e3b14556dfeb010865e41a9473419ccda16559139aa469086b1fff9abfd337e87387fdec1c64
diff --git a/sys-cluster/openmpi/openmpi-4.0.4.ebuild b/sys-cluster/openmpi/openmpi-4.0.4.ebuild
new file mode 100644
index 00000000000..082ecda8d6d
--- /dev/null
+++ b/sys-cluster/openmpi/openmpi-4.0.4.ebuild
@@ -0,0 +1,166 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+FORTRAN_NEEDED=fortran
+
+inherit cuda flag-o-matic fortran-2 java-pkg-opt-2 toolchain-funcs multilib multilib-minimal
+
+MY_P=${P/-mpi}
+S=${WORKDIR}/${MY_P}
+
+IUSE_OPENMPI_FABRICS="
+ openmpi_fabrics_ofed
+ openmpi_fabrics_knem
+ openmpi_fabrics_psm"
+
+IUSE_OPENMPI_RM="
+ openmpi_rm_pbs
+ openmpi_rm_slurm"
+
+IUSE_OPENMPI_OFED_FEATURES="
+ openmpi_ofed_features_control-hdr-padding
+ openmpi_ofed_features_udcm
+ openmpi_ofed_features_rdmacm
+ openmpi_ofed_features_dynamic-sl"
+
+DESCRIPTION="A high-performance message passing library (MPI)"
+HOMEPAGE="https://www.open-mpi.org"
+SRC_URI="https://www.open-mpi.org/software/ompi/v$(ver_cut 1-2)/downloads/${MY_P}.tar.bz2"
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~alpha ~amd64 ~arm ~ia64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux"
+IUSE="cma cuda cxx fortran heterogeneous ipv6 java romio
+ ${IUSE_OPENMPI_FABRICS} ${IUSE_OPENMPI_RM} ${IUSE_OPENMPI_OFED_FEATURES}"
+
+REQUIRED_USE="openmpi_rm_slurm? ( !openmpi_rm_pbs )
+ openmpi_rm_pbs? ( !openmpi_rm_slurm )
+ openmpi_fabrics_psm? ( openmpi_fabrics_ofed )
+ openmpi_ofed_features_control-hdr-padding? ( openmpi_fabrics_ofed )
+ openmpi_ofed_features_udcm? ( openmpi_fabrics_ofed )
+ openmpi_ofed_features_rdmacm? ( openmpi_fabrics_ofed )
+ openmpi_ofed_features_dynamic-sl? ( openmpi_fabrics_ofed )"
+
+CDEPEND="
+ !sys-cluster/mpich
+ !sys-cluster/mpich2
+ !sys-cluster/nullmpi
+ >=dev-libs/libevent-2.0.22:=[${MULTILIB_USEDEP},threads]
+ dev-libs/libltdl:0[${MULTILIB_USEDEP}]
+ >=sys-apps/hwloc-2.0.2[${MULTILIB_USEDEP}]
+ >=sys-libs/zlib-1.2.8-r1[${MULTILIB_USEDEP}]
+ cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.19-r1:= )
+ openmpi_fabrics_ofed? ( sys-fabric/ofed:* )
+ openmpi_fabrics_knem? ( sys-cluster/knem )
+ openmpi_fabrics_psm? ( sys-fabric/infinipath-psm:* )
+ openmpi_rm_pbs? ( sys-cluster/torque )
+ openmpi_rm_slurm? ( sys-cluster/slurm )
+ openmpi_ofed_features_rdmacm? ( sys-fabric/librdmacm:* )"
+
+RDEPEND="${CDEPEND}
+ java? ( >=virtual/jre-1.6 )"
+
+DEPEND="${CDEPEND}
+ java? ( >=virtual/jdk-1.6 )"
+
+MULTILIB_WRAPPED_HEADERS=(
+ /usr/include/mpi.h
+ /usr/include/openmpi/ompi/mpi/java/mpiJava.h
+)
+
+pkg_setup() {
+ fortran-2_pkg_setup
+ java-pkg-opt-2_pkg_setup
+
+ elog
+ elog "OpenMPI has an overwhelming count of configuration options."
+ elog "Don't forget the EXTRA_ECONF environment variable can let you"
+ elog "specify configure options if you find them necessary."
+ elog
+}
+
+src_prepare() {
+ default
+
+ # Necessary for scalibility, see
+ # http://www.open-mpi.org/community/lists/users/2008/09/6514.php
+ echo 'oob_tcp_listen_mode = listen_thread' \
+ >> opal/etc/openmpi-mca-params.conf || die
+}
+
+multilib_src_configure() {
+ if use java; then
+ # We must always build with the right -source and -target
+ # flags. Passing flags to javac isn't explicitly supported here
+ # but we can cheat by overriding the configure test for javac.
+ export ac_cv_path_JAVAC="$(java-pkg_get-javac) $(java-pkg_javac-args)"
+ fi
+
+ ECONF_SOURCE=${S} econf \
+ --sysconfdir="${EPREFIX}/etc/${PN}" \
+ --enable-pretty-print-stacktrace \
+ --enable-orterun-prefix-by-default \
+ --with-hwloc="${EPREFIX}/usr" \
+ --with-hwloc-libdir="${EPREFIX}/usr/$(get_libdir)" \
+ --with-libltdl="${EPREFIX}/usr" \
+ --with-libevent="${EPREFIX}/usr" \
+ --with-libevent-libdir="${EPREFIX}/usr/$(get_libdir)" \
+ --enable-mpi-fortran=$(usex fortran all no) \
+ $(use_enable cxx mpi-cxx) \
+ $(use_with cma) \
+ $(multilib_native_use_with cuda cuda "${EPREFIX}"/opt/cuda) \
+ $(use_enable romio io-romio) \
+ $(use_enable heterogeneous) \
+ $(use_enable ipv6) \
+ $(multilib_native_use_enable java mpi-java) \
+ $(multilib_native_use_with openmpi_fabrics_ofed verbs "${EPREFIX}"/usr) \
+ $(multilib_native_use_with openmpi_fabrics_knem knem "${EPREFIX}"/usr) \
+ $(multilib_native_use_with openmpi_fabrics_psm psm "${EPREFIX}"/usr) \
+ $(multilib_native_use_enable openmpi_ofed_features_control-hdr-padding openib-control-hdr-padding) \
+ $(multilib_native_use_enable openmpi_ofed_features_rdmacm openib-rdmacm) \
+ $(multilib_native_use_enable openmpi_ofed_features_udcm openib-udcm) \
+ $(multilib_native_use_enable openmpi_ofed_features_dynamic-sl openib-dynamic-sl) \
+ $(multilib_native_use_with openmpi_rm_pbs tm) \
+ $(multilib_native_use_with openmpi_rm_slurm slurm)
+}
+
+multilib_src_test() {
+ # Doesn't work with the default src_test as the dry run (-n) fails.
+ emake -j1 check
+}
+
+multilib_src_install() {
+ default
+
+ # fortran header cannot be wrapped (bug #540508), workaround part 1
+ if multilib_is_native_abi && use fortran; then
+ mkdir "${T}"/fortran || die
+ mv "${ED}"/usr/include/mpif* "${T}"/fortran || die
+ else
+ # some fortran files get installed unconditionally
+ rm \
+ "${ED}"/usr/include/mpif* \
+ "${ED}"/usr/bin/mpif* \
+ || die
+ fi
+}
+
+multilib_src_install_all() {
+ # fortran header cannot be wrapped (bug #540508), workaround part 2
+ if use fortran; then
+ mv "${T}"/fortran/mpif* "${ED}"/usr/include || die
+ fi
+
+ # Remove la files, no static libs are installed and we have pkg-config
+ find "${ED}" -name '*.la' -delete || die
+
+ if use java; then
+ local mpi_jar="${ED}"/usr/$(get_libdir)/mpi.jar
+ java-pkg_dojar "${mpi_jar}"
+ # We don't want to install the jar file twice
+ # so let's clean after ourselves.
+ rm "${mpi_jar}" || die
+ fi
+ einstalldocs
+}