From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 29E781382C5 for ; Thu, 21 May 2020 08:14:19 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 0AD57E089A; Thu, 21 May 2020 08:14:18 +0000 (UTC) Received: from smtp.gentoo.org (woodpecker.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id BE154E089A for ; Thu, 21 May 2020 08:14:17 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 3E16A34F594 for ; Thu, 21 May 2020 08:14:16 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 3354E242 for ; Thu, 21 May 2020 08:14:14 +0000 (UTC) From: "Andreas Sturmlechner" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Andreas Sturmlechner" Message-ID: <1590048795.32291a189d949496247c3cc73bca19b59ef69c0f.asturm@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/mustang/ X-VCS-Repository: repo/gentoo X-VCS-Files: sci-chemistry/mustang/Manifest sci-chemistry/mustang/mustang-3.2.1.ebuild X-VCS-Directories: sci-chemistry/mustang/ X-VCS-Committer: asturm X-VCS-Committer-Name: Andreas Sturmlechner X-VCS-Revision: 32291a189d949496247c3cc73bca19b59ef69c0f X-VCS-Branch: master Date: Thu, 21 May 2020 08:14:14 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: d89aa8ac-ec9f-4e7f-898e-1819eafd2899 X-Archives-Hash: dc8fa3d1485cecf23ba0fedfd3de6442 commit: 32291a189d949496247c3cc73bca19b59ef69c0f Author: Andreas Sturmlechner gentoo org> AuthorDate: Thu May 21 08:10:18 2020 +0000 Commit: Andreas Sturmlechner gentoo org> CommitDate: Thu May 21 08:13:15 2020 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=32291a18 sci-chemistry/mustang: Drop 3.2.1 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Andreas Sturmlechner gentoo.org> sci-chemistry/mustang/Manifest | 1 - sci-chemistry/mustang/mustang-3.2.1.ebuild | 48 ------------------------------ 2 files changed, 49 deletions(-) diff --git a/sci-chemistry/mustang/Manifest b/sci-chemistry/mustang/Manifest index 1bb10e0d7b7..e053c2f20e0 100644 --- a/sci-chemistry/mustang/Manifest +++ b/sci-chemistry/mustang/Manifest @@ -1,2 +1 @@ -DIST mustang_v3.2.1.tgz 161216 BLAKE2B 8e96ecc7a77eeb9729f4c7f050f8c088e7b57c8d6c9bf436efc173449157db40fe0ef826249fc006edd5b3d87fa8a7b49708f14e8768aba1f6e7ac243f3e0bbf SHA512 aee37bb77edbdc601cdc735db8602d0a3804065200df1b36b6956e74dfd5f85b554a655be1bfbe673aada1abd5e1aee1c0f59fb2ff0380bfcb725e38439d41ff DIST mustang_v3.2.2.tgz 141940 BLAKE2B b90b42df782bd1dbdb387d0d0ab42430c5212b439da84f56a33ca2c746c8937ae330dfb8d634e7d1c5ffd0f6959cd9e4be0efe8f569c452930a3481894c68ec5 SHA512 cb862f860f3cdb3349743c6005a29acc14cde5269df9d61f1100ffdc9a22c1d8e3dd46771371557b823724e79783f8fcb7356c63c6f0c0a09aac09bee407a26d diff --git a/sci-chemistry/mustang/mustang-3.2.1.ebuild b/sci-chemistry/mustang/mustang-3.2.1.ebuild deleted file mode 100644 index 47e67a964a4..00000000000 --- a/sci-chemistry/mustang/mustang-3.2.1.ebuild +++ /dev/null @@ -1,48 +0,0 @@ -# Copyright 1999-2012 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=4 - -inherit eutils toolchain-funcs - -MY_PN="MUSTANG" -SRC_P="${PN}_v${PV}" -MY_P="${MY_PN}_v${PV}" - -DESCRIPTION="MUltiple STructural AligNment AlGorithm" -HOMEPAGE="http://www.csse.monash.edu.au/~karun/Site/mustang.html" -SRC_URI="http://www.csse.unimelb.edu.au/~arun/${PN}/${SRC_P}.tgz" - -LICENSE="BSD" -SLOT="0" -KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux" -IUSE="" - -S="${WORKDIR}/${MY_P}" - -src_prepare() { - epatch "${FILESDIR}"/${P}-gcc-4.7.patch -} - -src_compile() { - emake \ - CPP=$(tc-getCXX) \ - CPPFLAGS="${CXXFLAGS}" \ - LDFLAGS="${LDFLAGS}" -} - -src_test() { - ./bin/${P} -f ./data/test/test_zf-CCHH || die -} - -src_install() { - newbin bin/${P} mustang - doman man/${PN}.1 - dodoc README -} - -pkg_postinst() { - elog "If you use this program for an academic paper, please cite:" - elog "Arun S. Konagurthu, James C. Whisstock, Peter J. Stuckey, and Arthur M. Lesk" - elog "Proteins: Structure, Function, and Bioinformatics. 64(3):559-574, Aug. 2006" -}