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From: "Martin Mokrejs" <mmokrejs@fold.natur.cuni.cz>
To: gentoo-commits@lists.gentoo.org
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/tablet/
Date: Mon, 25 Mar 2019 09:30:24 +0000 (UTC)	[thread overview]
Message-ID: <1553505931.d54980d211f803108c958cd6b255827a0f9bd2a5.mmokrejs@gentoo> (raw)

commit:     d54980d211f803108c958cd6b255827a0f9bd2a5
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Mar 25 09:25:31 2019 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Mar 25 09:25:31 2019 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=d54980d2

sci-biology/tablet: drop old version

 sci-biology/tablet/tablet-1.15.09.01.ebuild | 51 -----------------------------
 1 file changed, 51 deletions(-)

diff --git a/sci-biology/tablet/tablet-1.15.09.01.ebuild b/sci-biology/tablet/tablet-1.15.09.01.ebuild
deleted file mode 100644
index c0b67d139..000000000
--- a/sci-biology/tablet/tablet-1.15.09.01.ebuild
+++ /dev/null
@@ -1,51 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit java-pkg-2 java-ant-2 python-r1
-
-# [ "$PV" == "9999" ] && inherit subversion
-inherit subversion
-
-DESCRIPTION="Viewer of next generation sequence assemblies and alignments"
-HOMEPAGE="http://bioinf.scri.ac.uk/tablet/"
-if [ "$PV" == "9999" ]; then
-	ESVN_REPO_URI="http://ics.hutton.ac.uk/svn/tablet/trunk/"
-	KEYWORDS=""
-else
-	ESVN_REPO_URI="http://ics.hutton.ac.uk/svn/tablet/tags/${PV}"
-	KEYWORDS="~amd64 ~x86"
-fi
-
-LICENSE="Tablet"
-SLOT="0"
-IUSE=""
-
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-DEPEND="${PYTHON_DEPS}
-	>=virtual/jdk-1.8:*"
-RDEPEND="${PYTHON_DEPS}
-	>=virtual/jre-1.8:*"
-# contains bundled sqlite-jdbc-3.8.6.jar, samtools-linux64.jar, picard.jar
-# sqlite-jdbc-3.8.6.jar is not dev-db/sqlite:3 and samtools-linux64.jar is not sci-biology/samtools either
-# replacing picard.jar with a symlink to picard.jar from sci-biology.picard does not help either
-
-S="${WORKDIR}"
-
-src_install() {
-	java-pkg_dojar lib/tablet.jar
-	java-pkg_dolauncher ${PN}
-	java-pkg_dojar lib/tablet-resources.jar
-	java-pkg_dojar lib/flamingo.jar
-	java-pkg_dojar lib/scri-commons.jar
-	java-pkg_dojar lib/samtools*.jar
-	java-pkg_dojar lib/picard*.jar
-	java-pkg_dojar lib/sqlite-jdbc*.jar
-
-	echo "PATH=${EPREFIX}/usr/share/${PN}/" > 99Tablet
-	doenvd 99Tablet
-}


             reply	other threads:[~2019-03-25  9:30 UTC|newest]

Thread overview: 11+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2019-03-25  9:30 Martin Mokrejs [this message]
  -- strict thread matches above, loose matches on Subject: below --
2019-03-28 22:06 [gentoo-commits] proj/sci:master commit in: sci-biology/tablet/ Martin Mokrejs
2019-03-25 11:56 Martin Mokrejs
2019-03-25  9:30 Martin Mokrejs
2017-02-20 23:44 Martin Mokrejs
2017-02-20 11:58 Martin Mokrejs
2017-02-19  0:54 Martin Mokrejs
2015-02-18 16:41 Justin Lecher
2015-02-18 16:41 Justin Lecher
2015-01-09 15:35 Martin Mokrejs
2014-07-02 22:42 Martin Mokrejs

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