From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 641BF138334 for ; Thu, 28 Jun 2018 21:28:31 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 6FE72E09A2; Thu, 28 Jun 2018 21:28:30 +0000 (UTC) Received: from smtp.gentoo.org (dev.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 2B3D0E09A2 for ; Thu, 28 Jun 2018 21:28:30 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 235B9335C71 for ; Thu, 28 Jun 2018 21:28:28 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 472C22B3 for ; Thu, 28 Jun 2018 21:28:26 +0000 (UTC) From: "Alexey Shvetsov" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Alexey Shvetsov" Message-ID: <1530221289.37d77f4d6250277c494aa6353f3cebe49db2e900.alexxy@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/mdtraj/ X-VCS-Repository: repo/gentoo X-VCS-Files: sci-chemistry/mdtraj/Manifest sci-chemistry/mdtraj/mdtraj-1.9.1.ebuild sci-chemistry/mdtraj/metadata.xml X-VCS-Directories: sci-chemistry/mdtraj/ X-VCS-Committer: alexxy X-VCS-Committer-Name: Alexey Shvetsov X-VCS-Revision: 37d77f4d6250277c494aa6353f3cebe49db2e900 X-VCS-Branch: master Date: Thu, 28 Jun 2018 21:28:26 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: ebcf6128-e416-4085-9812-4610630627ec X-Archives-Hash: d64e6fcd4d2920bcd61f1e90051cf2ff commit: 37d77f4d6250277c494aa6353f3cebe49db2e900 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Jun 28 21:28:09 2018 +0000 Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Jun 28 21:28:09 2018 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=37d77f4d sci-chemistry/mdtraj: Initial import Package-Manager: Portage-2.3.41, Repoman-2.3.9 sci-chemistry/mdtraj/Manifest | 1 + sci-chemistry/mdtraj/mdtraj-1.9.1.ebuild | 34 ++++++++++++++++++++++++++++++++ sci-chemistry/mdtraj/metadata.xml | 8 ++++++++ 3 files changed, 43 insertions(+) diff --git a/sci-chemistry/mdtraj/Manifest b/sci-chemistry/mdtraj/Manifest new file mode 100644 index 00000000000..982cdea3569 --- /dev/null +++ b/sci-chemistry/mdtraj/Manifest @@ -0,0 +1 @@ +DIST mdtraj-1.9.1.tar.gz 1985711 BLAKE2B 625b7c1da998bd46732604dcc93c76f970f3c79f10e81aa9f4b3051ee45101efea8afd803d539ba1831dac3e7ed208d7c3773f74189a3887063cbff2b4d79df6 SHA512 015d9d1e258a7a207ac3b7e7a81b87c308e8684ee0a173ae9b722a90910e95e7f2ee18158c163212fae39d093b0cf397293d6e713538acb1fd20a7b70f2adc76 diff --git a/sci-chemistry/mdtraj/mdtraj-1.9.1.ebuild b/sci-chemistry/mdtraj/mdtraj-1.9.1.ebuild new file mode 100644 index 00000000000..20033bd3da6 --- /dev/null +++ b/sci-chemistry/mdtraj/mdtraj-1.9.1.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2018 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +PYTHON_COMPAT=( python{2_7,3_5,3_6} ) + +inherit distutils-r1 + +DESCRIPTION="Read, write and analyze MD trajectories with only a few lines of Python code" +HOMEPAGE="http://mdtraj.org" +SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz" + +SLOT="0" +LICENSE="GPL-2" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="test" + +RDEPEND=" + dev-python/setuptools[${PYTHON_USEDEP}] + dev-python/numpy[${PYTHON_USEDEP}] + sci-libs/scipy[${PYTHON_USEDEP}] + dev-python/pandas[${PYTHON_USEDEP}] + dev-python/pytables[${PYTHON_USEDEP}] + dev-python/networkx[${PYTHON_USEDEP}] +" +DEPEND="${RDEPEND} + test? ( dev-python/nose[${PYTHON_USEDEP}] )" + +python_prepare() { + sed -e "s:re.match('build.*(mdtraj.*)', output_dir).group(1):'.':g" \ + -i basesetup.py || die + distutils-r1_python_prepare_all +} \ No newline at end of file diff --git a/sci-chemistry/mdtraj/metadata.xml b/sci-chemistry/mdtraj/metadata.xml new file mode 100644 index 00000000000..8425c0d53cb --- /dev/null +++ b/sci-chemistry/mdtraj/metadata.xml @@ -0,0 +1,8 @@ + + + + + sci@gentoo.org + Gentoo Science Project + +