From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 5B2F01382C5 for ; Thu, 12 Apr 2018 11:51:24 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 79F94E079C; Thu, 12 Apr 2018 11:51:22 +0000 (UTC) Received: from smtp.gentoo.org (woodpecker.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 50D31E079C for ; Thu, 12 Apr 2018 11:51:21 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 83C8C335C74 for ; Thu, 12 Apr 2018 11:51:20 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id AF896274 for ; Thu, 12 Apr 2018 11:51:18 +0000 (UTC) From: "Martin Mokrejs" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Martin Mokrejs" Message-ID: <1523533870.ff9e6f5b5058cf7f019d76a428ed03421e2d1f91.mmokrejs@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/picard/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/picard/picard-2.18.2.ebuild X-VCS-Directories: sci-biology/picard/ X-VCS-Committer: mmokrejs X-VCS-Committer-Name: Martin Mokrejs X-VCS-Revision: ff9e6f5b5058cf7f019d76a428ed03421e2d1f91 X-VCS-Branch: master Date: Thu, 12 Apr 2018 11:51:18 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 70aba15e-4d81-48a3-9665-fdef5ee1b26d X-Archives-Hash: 2cf811c5ce5053845872d9c629198b19 commit: ff9e6f5b5058cf7f019d76a428ed03421e2d1f91 Author: Martin Mokrejs fold natur cuni cz> AuthorDate: Thu Apr 12 11:51:10 2018 +0000 Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Thu Apr 12 11:51:10 2018 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=ff9e6f5b sci-biology/picard: do not compile testsuite by default Package-Manager: Portage-2.3.27, Repoman-2.3.9 sci-biology/picard/picard-2.18.2.ebuild | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/sci-biology/picard/picard-2.18.2.ebuild b/sci-biology/picard/picard-2.18.2.ebuild index 636bf879c..24ed178ce 100644 --- a/sci-biology/picard/picard-2.18.2.ebuild +++ b/sci-biology/picard/picard-2.18.2.ebuild @@ -46,7 +46,8 @@ src_compile(){ # work around gradle writing $HOME/.gradle, requiring $HOME/.git and $HOME/.m2/ # https://github.com/samtools/htsjdk/issues/660#issuecomment-232155965 # make jure SDK-1.8 is available, JRE-1.8 is not enough - GRADLE_USER_HOME="${WORKDIR}" ./gradlew --stacktrace --debug || die + # see more gradlew arg options in build.xml, especially jar versus shadowJar + GRADLE_USER_HOME="${WORKDIR}" ./gradlew --stacktrace --debug compileJava jar || die } src_install() {