[gentoo-commits] repo/gentoo:master commit in: sci-biology/trf/

[gentoo-commits] repo/gentoo:master commit in: sci-biology/trf/

[David Seifert]

commit:     b4e55ca62c37097321fa10649161d8718b15bdca
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Sat Feb 25 20:18:05 2017 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sat Feb 25 20:35:08 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b4e55ca6

sci-biology/trf: Modernise to EAPI 6

Package-Manager: Portage-2.3.3, Repoman-2.3.1

 sci-biology/trf/{trf-4.04.ebuild => trf-4.04-r1.ebuild} | 13 +++----------
 1 file changed, 3 insertions(+), 10 deletions(-)

diff --git a/sci-biology/trf/trf-4.04.ebuild b/sci-biology/trf/trf-4.04-r1.ebuild
similarity index 64%
rename from sci-biology/trf/trf-4.04.ebuild
rename to sci-biology/trf/trf-4.04-r1.ebuild
index 81d540251f..6ea8e1e0f2 100644
--- a/sci-biology/trf/trf-4.04.ebuild
+++ b/sci-biology/trf/trf-4.04-r1.ebuild
@@ -1,10 +1,8 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
-EAPI=4
-
-inherit eutils
+EAPI=6
 
 MY_P="${PN}404"
 
@@ -17,7 +15,7 @@ SLOT="0"
 KEYWORDS="amd64 x86"
 RESTRICT="mirror bindist"
 
-S="${WORKDIR}"
+S=${WORKDIR}
 
 QA_PREBUILT="opt/${PN}/.*"
 
@@ -29,9 +27,4 @@ src_install() {
 	exeinto /opt/${PN}
 	doexe trf404.linux.exe
 	dosym /opt/${PN}/${MY_P}.linux.exe /opt/bin/trf
-	# GTK version (http://tandem.bu.edu/trf/downloads/trf400.linuxgtk.exe) has broken linking
-	#if use gtk; then
-	#	doexe trf400.linuxgtk.exe || die
-	#	make_desktop_entry /opt/${PN}/trf400.linuxgtk.exe "Tandem Repeats Finder" || die
-	#fi
 }

[gentoo-commits] repo/gentoo:master commit in: sci-biology/trf/

[David Seifert]

commit:     0693e7cba36ecc4f4162e62e4bbd0a5ce4fca50b
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Thu Jul  7 19:57:14 2022 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Thu Jul  7 19:57:14 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0693e7cb

sci-biology/trf: update EAPI 6 -> 8

Signed-off-by: David Seifert <soap <AT> gentoo.org>

 .../trf/{trf-4.04-r1.ebuild => trf-4.04-r2.ebuild}        | 15 +++++++--------
 1 file changed, 7 insertions(+), 8 deletions(-)

diff --git a/sci-biology/trf/trf-4.04-r1.ebuild b/sci-biology/trf/trf-4.04-r2.ebuild
similarity index 64%
rename from sci-biology/trf/trf-4.04-r1.ebuild
rename to sci-biology/trf/trf-4.04-r2.ebuild
index 3b906fb31aaf..c534b74988bd 100644
--- a/sci-biology/trf/trf-4.04-r1.ebuild
+++ b/sci-biology/trf/trf-4.04-r2.ebuild
@@ -1,29 +1,28 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2022 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=6
+EAPI=8
 
 MY_P="${PN}404"
 
 DESCRIPTION="Tandem Repeats Finder"
 HOMEPAGE="http://tandem.bu.edu/trf/trf.html"
 SRC_URI="http://tandem.bu.edu/trf/downloads/${MY_P}.linux"
+S="${WORKDIR}"
 
 LICENSE="trf"	# http://tandem.bu.edu/trf/trf.license.html
 SLOT="0"
 KEYWORDS="amd64 x86"
 RESTRICT="mirror bindist"
 
-S=${WORKDIR}
-
-QA_PREBUILT="opt/${PN}/.*"
+QA_PREBUILT="opt/trf/.*"
 
 src_unpack() {
-	cp "${DISTDIR}/${MY_P}.linux" "${S}/${MY_P}.linux.exe" || die
+	cp "${DISTDIR}"/${MY_P}.linux "${S}"/${MY_P}.linux.exe || die
 }
 
 src_install() {
-	exeinto /opt/${PN}
+	exeinto /opt/trf
 	doexe trf404.linux.exe
-	dosym /opt/${PN}/${MY_P}.linux.exe /opt/bin/trf
+	dosym ../trf/${MY_P}.linux.exe /opt/bin/trf
 }

[gentoo-commits] repo/gentoo:master commit in: sci-biology/trf/

[Andrew Ammerlaan]

commit:     d14f695cbd0d8ff2c329ed47e44d5a5e66367b21
Author:     Michael Mair-Keimberger <mmk <AT> levelnine <DOT> at>
AuthorDate: Tue Aug  2 17:09:00 2022 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Tue Aug 23 12:06:13 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=d14f695c

sci-biology/trf: use HTTPS

Signed-off-by: Michael Mair-Keimberger <mmk <AT> levelnine.at>
Portage 3.0.34 / pkgdev 0.2.1 / pkgcheck 0.10.11
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 sci-biology/trf/trf-4.04-r2.ebuild | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-biology/trf/trf-4.04-r2.ebuild b/sci-biology/trf/trf-4.04-r2.ebuild
index c534b74988bd..16cbb1c3cab9 100644
--- a/sci-biology/trf/trf-4.04-r2.ebuild
+++ b/sci-biology/trf/trf-4.04-r2.ebuild
@@ -6,8 +6,8 @@ EAPI=8
 MY_P="${PN}404"
 
 DESCRIPTION="Tandem Repeats Finder"
-HOMEPAGE="http://tandem.bu.edu/trf/trf.html"
-SRC_URI="http://tandem.bu.edu/trf/downloads/${MY_P}.linux"
+HOMEPAGE="https://tandem.bu.edu/trf/trf.html"
+SRC_URI="https://tandem.bu.edu/trf/downloads/${MY_P}.linux"
 S="${WORKDIR}"
 
 LICENSE="trf"	# http://tandem.bu.edu/trf/trf.license.html