* [gentoo-commits] proj/sci:master commit in: sci-biology/FLASH/
@ 2014-03-16 14:37 Martin Mokrejs
0 siblings, 0 replies; 4+ messages in thread
From: Martin Mokrejs @ 2014-03-16 14:37 UTC (permalink / raw
To: gentoo-commits
commit: 143318ce2bd8e33cac0ce18fa643b68740acae0d
Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sun Mar 16 14:36:41 2014 +0000
Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Sun Mar 16 14:36:41 2014 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=143318ce
sci/biology/FLASH: new package
Package-Manager: portage-2.2.7
---
sci-biology/FLASH/ChangeLog | 9 +++++++++
sci-biology/FLASH/FLASH-1.2.9.ebuild | 22 ++++++++++++++++++++++
sci-biology/FLASH/metadata.xml | 9 +++++++++
3 files changed, 40 insertions(+)
diff --git a/sci-biology/FLASH/ChangeLog b/sci-biology/FLASH/ChangeLog
new file mode 100644
index 0000000..ade97b8
--- /dev/null
+++ b/sci-biology/FLASH/ChangeLog
@@ -0,0 +1,9 @@
+# ChangeLog for sci-biology/FLASH
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*FLASH-1.2.9 (16 Mar 2014)
+
+ 16 Mar 2014; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> +FLASH-1.2.9.ebuild,
+ +metadata.xml:
+ sci/biology/FLASH: new package
diff --git a/sci-biology/FLASH/FLASH-1.2.9.ebuild b/sci-biology/FLASH/FLASH-1.2.9.ebuild
new file mode 100644
index 0000000..c8f286f
--- /dev/null
+++ b/sci-biology/FLASH/FLASH-1.2.9.ebuild
@@ -0,0 +1,22 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+DESCRIPTION="Merge paired-end mates from fragments that are shorter than twice the read length "
+HOMEPAGE="http://sourceforge.net/projects/flashpage"
+SRC_URI="http://downloads.sourceforge.net/project/flashpage/FLASH-1.2.9.tar.gz"
+
+LICENSE="GPL-3"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE=""
+
+DEPEND=""
+RDEPEND="${DEPEND}"
+
+src_install(){
+ dobin flash
+ dodoc NEWS README
+}
diff --git a/sci-biology/FLASH/metadata.xml b/sci-biology/FLASH/metadata.xml
new file mode 100644
index 0000000..2bc8930
--- /dev/null
+++ b/sci-biology/FLASH/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <herd>sci-biology</herd>
+ <maintainer>
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+</pkgmetadata>
^ permalink raw reply related [flat|nested] 4+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-biology/FLASH/
@ 2014-03-22 9:45 Justin Lecher
0 siblings, 0 replies; 4+ messages in thread
From: Justin Lecher @ 2014-03-22 9:45 UTC (permalink / raw
To: gentoo-commits
commit: 36f45c67f919cea30c22a7436c8c226dfea1857f
Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sun Mar 16 14:36:41 2014 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Mar 22 09:44:40 2014 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=36f45c67
sci/biology/FLASH: new package
Package-Manager: portage-2.2.7
---
sci-biology/FLASH/ChangeLog | 9 +++++++++
sci-biology/FLASH/FLASH-1.2.9.ebuild | 22 ++++++++++++++++++++++
sci-biology/FLASH/metadata.xml | 9 +++++++++
3 files changed, 40 insertions(+)
diff --git a/sci-biology/FLASH/ChangeLog b/sci-biology/FLASH/ChangeLog
new file mode 100644
index 0000000..ade97b8
--- /dev/null
+++ b/sci-biology/FLASH/ChangeLog
@@ -0,0 +1,9 @@
+# ChangeLog for sci-biology/FLASH
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*FLASH-1.2.9 (16 Mar 2014)
+
+ 16 Mar 2014; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> +FLASH-1.2.9.ebuild,
+ +metadata.xml:
+ sci/biology/FLASH: new package
diff --git a/sci-biology/FLASH/FLASH-1.2.9.ebuild b/sci-biology/FLASH/FLASH-1.2.9.ebuild
new file mode 100644
index 0000000..c8f286f
--- /dev/null
+++ b/sci-biology/FLASH/FLASH-1.2.9.ebuild
@@ -0,0 +1,22 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+DESCRIPTION="Merge paired-end mates from fragments that are shorter than twice the read length "
+HOMEPAGE="http://sourceforge.net/projects/flashpage"
+SRC_URI="http://downloads.sourceforge.net/project/flashpage/FLASH-1.2.9.tar.gz"
+
+LICENSE="GPL-3"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE=""
+
+DEPEND=""
+RDEPEND="${DEPEND}"
+
+src_install(){
+ dobin flash
+ dodoc NEWS README
+}
diff --git a/sci-biology/FLASH/metadata.xml b/sci-biology/FLASH/metadata.xml
new file mode 100644
index 0000000..2bc8930
--- /dev/null
+++ b/sci-biology/FLASH/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <herd>sci-biology</herd>
+ <maintainer>
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+</pkgmetadata>
^ permalink raw reply related [flat|nested] 4+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-biology/FLASH/
@ 2017-01-29 20:25 Justin Lecher
0 siblings, 0 replies; 4+ messages in thread
From: Justin Lecher @ 2017-01-29 20:25 UTC (permalink / raw
To: gentoo-commits
commit: 82d8becafb966e820932353c9ad64f445fd29316
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sun Jan 29 20:17:27 2017 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Jan 29 20:25:15 2017 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=82d8beca
sci-biology/FLASH: QA fixes
Bump to EAPI 6
shorten DESCRIPTION
Package-Manager: Portage-2.3.3, Repoman-2.3.1
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
sci-biology/FLASH/FLASH-1.2.9.ebuild | 9 +++------
1 file changed, 3 insertions(+), 6 deletions(-)
diff --git a/sci-biology/FLASH/FLASH-1.2.9.ebuild b/sci-biology/FLASH/FLASH-1.2.9.ebuild
index 31e2de3..6fa4cda 100644
--- a/sci-biology/FLASH/FLASH-1.2.9.ebuild
+++ b/sci-biology/FLASH/FLASH-1.2.9.ebuild
@@ -1,10 +1,10 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
-EAPI=5
+EAPI=6
-DESCRIPTION="Merge paired-end mates from fragments that are shorter than twice the read length "
+DESCRIPTION="Paired-end mates merge from fragments"
HOMEPAGE="http://sourceforge.net/projects/flashpage"
SRC_URI="http://downloads.sourceforge.net/project/flashpage/FLASH-1.2.9.tar.gz"
@@ -13,9 +13,6 @@ SLOT="0"
KEYWORDS="~amd64"
IUSE=""
-DEPEND=""
-RDEPEND="${DEPEND}"
-
src_install(){
dobin flash
dodoc NEWS README
^ permalink raw reply related [flat|nested] 4+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-biology/FLASH/
@ 2023-03-03 19:46 Horea Christian
0 siblings, 0 replies; 4+ messages in thread
From: Horea Christian @ 2023-03-03 19:46 UTC (permalink / raw
To: gentoo-commits
commit: 1a2854aa83dc07097596a5e987d2fcdcaa4a3df2
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Fri Mar 3 19:46:01 2023 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Fri Mar 3 19:46:01 2023 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=1a2854aa
sci-biology/FLASH: update upstream metadata
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
sci-biology/FLASH/metadata.xml | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-biology/FLASH/metadata.xml b/sci-biology/FLASH/metadata.xml
index 0f267b755..7dc91092f 100644
--- a/sci-biology/FLASH/metadata.xml
+++ b/sci-biology/FLASH/metadata.xml
@@ -10,6 +10,6 @@
<name>Gentoo Biology Project</name>
</maintainer>
<upstream>
- <remote-id type="sourceforge">downloads</remote-id>
+ <remote-id type="sourceforge">flashpage</remote-id>
</upstream>
</pkgmetadata>
^ permalink raw reply related [flat|nested] 4+ messages in thread
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