[gentoo-commits] proj/sci:master commit in: sci-biology/grabix/

[gentoo-commits] proj/sci:master commit in: sci-biology/grabix/

[Martin Mokrejs]

commit:     728a5034d27406862c38447b2fce18b34e84b01b
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Jan  9 01:40:11 2017 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Jan  9 01:40:11 2017 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=728a5034

sci-biology/grabix: new package

Package-Manager: Portage-2.3.3, Repoman-2.3.1

 sci-biology/grabix/grabix-9999.ebuild | 27 +++++++++++++++++++++++++++
 sci-biology/grabix/metadata.xml       | 12 ++++++++++++
 2 files changed, 39 insertions(+)

diff --git a/sci-biology/grabix/grabix-9999.ebuild b/sci-biology/grabix/grabix-9999.ebuild
new file mode 100644
index 0000000..ef48213
--- /dev/null
+++ b/sci-biology/grabix/grabix-9999.ebuild
@@ -0,0 +1,27 @@
+# Copyright 1999-2017 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=6
+
+inherit git-r3 toolchain-funcs
+
+DESCRIPTION="Provide random access to text files BGZF compressed with bgzip"
+HOMEPAGE="https://github.com/arq5x/grabix"
+EGIT_REPO_URI="https://github.com/arq5x/grabix.git"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS=""
+IUSE=""
+
+DEPEND=""
+RDEPEND="${DEPEND}"
+
+src_compile(){
+	"$(tc-getCC)" ${CFLAGS} -o grabix grabix_main.cpp grabix.cpp bgzf.c -lstdc++ -lz || die
+}
+
+src_install(){
+	dobin grabix
+}

diff --git a/sci-biology/grabix/metadata.xml b/sci-biology/grabix/metadata.xml
new file mode 100644
index 0000000..f68a1b6
--- /dev/null
+++ b/sci-biology/grabix/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <maintainer type="person">
+    <email>mmokrejs@fold.natur.cuni.cz</email>
+    <name>Martin Mokrejs</name>
+  </maintainer>
+  <maintainer type="project">
+    <email>sci-biology@gentoo.org</email>
+    <name>Gentoo Biology Project</name>
+  </maintainer>
+</pkgmetadata>

[gentoo-commits] proj/sci:master commit in: sci-biology/grabix/

[Martin Mokrejs]

commit:     bfe7bcdcd673c826d6c63dac20a0d5ca0bad4346
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Jan  9 01:42:33 2017 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Jan  9 01:42:33 2017 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=bfe7bcdc

sci-biology/grabix: install README.md

Package-Manager: Portage-2.3.3, Repoman-2.3.1

 sci-biology/grabix/grabix-9999.ebuild | 1 +
 1 file changed, 1 insertion(+)

diff --git a/sci-biology/grabix/grabix-9999.ebuild b/sci-biology/grabix/grabix-9999.ebuild
index ef48213..318f918 100644
--- a/sci-biology/grabix/grabix-9999.ebuild
+++ b/sci-biology/grabix/grabix-9999.ebuild
@@ -24,4 +24,5 @@ src_compile(){
 
 src_install(){
 	dobin grabix
+	dodoc README.md
 }

[gentoo-commits] proj/sci:master commit in: sci-biology/grabix/

[Andrew Ammerlaan]

commit:     ec2f727715544b0d46b9a485fe430a620e747956
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Sat Mar  6 11:06:11 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Sat Mar  6 11:06:11 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=ec2f7277

sci-biology/grabix: EAPI bump

Package-Manager: Portage-3.0.16, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 sci-biology/grabix/grabix-9999.ebuild | 5 ++---
 1 file changed, 2 insertions(+), 3 deletions(-)

diff --git a/sci-biology/grabix/grabix-9999.ebuild b/sci-biology/grabix/grabix-9999.ebuild
index d32f4971b..db99ec960 100644
--- a/sci-biology/grabix/grabix-9999.ebuild
+++ b/sci-biology/grabix/grabix-9999.ebuild
@@ -1,7 +1,7 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2021 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=6
+EAPI=7
 
 inherit git-r3 toolchain-funcs
 
@@ -12,7 +12,6 @@ EGIT_REPO_URI="https://github.com/arq5x/grabix.git"
 LICENSE="MIT"
 SLOT="0"
 KEYWORDS=""
-IUSE=""
 
 DEPEND=""
 RDEPEND="${DEPEND}"