From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 10D4B1382DE for ; Thu, 30 Jun 2016 17:20:17 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id AA0C4E0AC9; Thu, 30 Jun 2016 17:20:13 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 4EAD8E0AC9 for ; Thu, 30 Jun 2016 17:20:12 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 548BA340DF4 for ; Thu, 30 Jun 2016 17:20:11 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 4998072 for ; Thu, 30 Jun 2016 17:20:04 +0000 (UTC) From: "Martin Mokrejs" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Martin Mokrejs" Message-ID: <1467307191.759fd10bc6e0ea8406ac7effe97fb17d740cf2fe.mmokrejs@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/exonerate-gff3/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/exonerate-gff3/exonerate-gff3-9999.ebuild X-VCS-Directories: sci-biology/exonerate-gff3/ X-VCS-Committer: mmokrejs X-VCS-Committer-Name: Martin Mokrejs X-VCS-Revision: 759fd10bc6e0ea8406ac7effe97fb17d740cf2fe X-VCS-Branch: master Date: Thu, 30 Jun 2016 17:20:04 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 0f4a3f60-1943-44af-97e4-c3ee26ca98d8 X-Archives-Hash: 1fdcda8d2d97211582b8c733736dfae9 commit: 759fd10bc6e0ea8406ac7effe97fb17d740cf2fe Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Thu Jun 30 17:19:51 2016 +0000 Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Thu Jun 30 17:19:51 2016 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=759fd10b sci-biology/exonerate-gff3: undo commit 5f9c9c1d2a68a9a5f29d3c060ff807becd70fe5f It is unclear to me what Justin did but seems it was by mistake. This changes now keeps this ebuild in sync with sci-biology/exonerate::gentoo ebuild and patches configure.in file again. This at least works for me. Package-Manager: portage-2.2.28 sci-biology/exonerate-gff3/exonerate-gff3-9999.ebuild | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/sci-biology/exonerate-gff3/exonerate-gff3-9999.ebuild b/sci-biology/exonerate-gff3/exonerate-gff3-9999.ebuild index fda6c78..48a49b6 100644 --- a/sci-biology/exonerate-gff3/exonerate-gff3-9999.ebuild +++ b/sci-biology/exonerate-gff3/exonerate-gff3-9999.ebuild @@ -35,7 +35,8 @@ src_prepare() { sed \ -e 's: -O3 -finline-functions::g' \ -i configure.in || die - mv configure.in configure.ac + # we patch the configure.in file like sci-biology/exonerate:gentoo does, though it is ugly hack + # mv configure.in configure.ac autotools-utils_src_prepare }