* [gentoo-commits] proj/sci:master commit in: sci-chemistry/modeller/
@ 2013-06-18 12:46 Justin Lecher
0 siblings, 0 replies; 9+ messages in thread
From: Justin Lecher @ 2013-06-18 12:46 UTC (permalink / raw
To: gentoo-commits
commit: fed9fc9877cf7fd5cb0f75c977a7f4297b4c31b5
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Tue Jun 18 12:46:32 2013 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Tue Jun 18 12:46:32 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=fed9fc98
sci-chemistry/modeller: Fix broken symlink, #473680
Package-Manager: portage-2.2.0_alpha180
---
sci-chemistry/modeller/ChangeLog | 6 ++++++
.../modeller/{modeller-9.12.ebuild => modeller-9.12-r1.ebuild} | 2 +-
2 files changed, 7 insertions(+), 1 deletion(-)
diff --git a/sci-chemistry/modeller/ChangeLog b/sci-chemistry/modeller/ChangeLog
index 198256b..2817f00 100644
--- a/sci-chemistry/modeller/ChangeLog
+++ b/sci-chemistry/modeller/ChangeLog
@@ -2,6 +2,12 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*modeller-9.12-r1 (18 Jun 2013)
+
+ 18 Jun 2013; Justin Lecher <jlec@gentoo.org> -modeller-9.12.ebuild,
+ +modeller-9.12-r1.ebuild:
+ Fix broken symlink, #473680
+
16 Jun 2013; Justin Lecher <jlec@gentoo.org> -modeller-9.8.ebuild,
+modeller-9.12.ebuild, metadata.xml:
Version BUmp; BUmp to EAPI5 and distutils-r1.eclass
diff --git a/sci-chemistry/modeller/modeller-9.12.ebuild b/sci-chemistry/modeller/modeller-9.12-r1.ebuild
similarity index 98%
rename from sci-chemistry/modeller/modeller-9.12.ebuild
rename to sci-chemistry/modeller/modeller-9.12-r1.ebuild
index 0cabf47..a25aa7f 100644
--- a/sci-chemistry/modeller/modeller-9.12.ebuild
+++ b/sci-chemistry/modeller/modeller-9.12-r1.ebuild
@@ -82,7 +82,7 @@ python_install_all(){
exeinto ${INPATH}/lib/${EXECTYPE}/
doexe lib/${EXECTYPE}/lib*
- dosym libmodeller.so.5 ${INPATH}/lib/${EXECTYPE}/libmodeller.so
+ dosym libmodeller.so.8 ${INPATH}/lib/${EXECTYPE}/libmodeller.so
use doc && HTML_DOCS=( doc/. )
distutils-r1_python_install_all
^ permalink raw reply related [flat|nested] 9+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-chemistry/modeller/
@ 2013-06-26 14:45 Justin Lecher
2013-06-26 14:55 ` Justin Lecher
0 siblings, 1 reply; 9+ messages in thread
From: Justin Lecher @ 2013-06-26 14:45 UTC (permalink / raw
To: gentoo-commits
commit: f663beb2c46742be193d69ca3abefddd81b0ef2b
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Wed Jun 26 14:40:11 2013 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jun 26 14:44:59 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f663beb2
sci-chemistry/modeller: Fix lib position, #474696
Package-Manager: portage-2.2.0_alpha184
---
sci-chemistry/modeller/ChangeLog | 4 ++++
.../modeller/{modeller-9.12-r1.ebuild => modeller-9.12-r2.ebuild} | 3 ++-
2 files changed, 6 insertions(+), 1 deletion(-)
diff --git a/sci-chemistry/modeller/ChangeLog b/sci-chemistry/modeller/ChangeLog
index 2817f00..cedd72b 100644
--- a/sci-chemistry/modeller/ChangeLog
+++ b/sci-chemistry/modeller/ChangeLog
@@ -2,6 +2,10 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 26 Jun 2013; Justin Lecher <jlec@gentoo.org> -modeller-9.12-r1.ebuild,
+ +modeller-9.12-r2.ebuild:
+ Fix lib position, #474696
+
*modeller-9.12-r1 (18 Jun 2013)
18 Jun 2013; Justin Lecher <jlec@gentoo.org> -modeller-9.12.ebuild,
diff --git a/sci-chemistry/modeller/modeller-9.12-r1.ebuild b/sci-chemistry/modeller/modeller-9.12-r2.ebuild
similarity index 96%
rename from sci-chemistry/modeller/modeller-9.12-r1.ebuild
rename to sci-chemistry/modeller/modeller-9.12-r2.ebuild
index a25aa7f..9cfd2e3 100644
--- a/sci-chemistry/modeller/modeller-9.12-r1.ebuild
+++ b/sci-chemistry/modeller/modeller-9.12-r2.ebuild
@@ -7,7 +7,7 @@ EAPI=5
PYTHON_COMPAT=( python{2_6,2_7,3_2,3_3} )
PYTHON_COMPAT=( python{2_6,2_7} )
-inherit distutils-r1 eutils versionator
+inherit distutils-r1 eutils multilib versionator
DESCRIPTION="Homology or comparative modeling of protein three-dimensional structures"
HOMEPAGE="http://salilab.org/modeller/"
@@ -83,6 +83,7 @@ python_install_all(){
exeinto ${INPATH}/lib/${EXECTYPE}/
doexe lib/${EXECTYPE}/lib*
dosym libmodeller.so.8 ${INPATH}/lib/${EXECTYPE}/libmodeller.so
+ dosym ../../${INPATH}/lib/${EXECTYPE}/libmodeller.so.8 /usr/$(get_libdir)/libmodeller.so.8
use doc && HTML_DOCS=( doc/. )
distutils-r1_python_install_all
^ permalink raw reply related [flat|nested] 9+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-chemistry/modeller/
@ 2013-06-26 14:53 Justin Lecher
0 siblings, 0 replies; 9+ messages in thread
From: Justin Lecher @ 2013-06-26 14:53 UTC (permalink / raw
To: gentoo-commits
commit: 4baaecc2af23ba92bed2d784e9bac7e837645f55
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Wed Jun 26 14:40:11 2013 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jun 26 14:49:54 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=4baaecc2
sci-chemistry/modeller: Fix lib position, #474696
Package-Manager: portage-2.2.0_alpha184
---
sci-chemistry/modeller/ChangeLog | 4 ++++
.../modeller/{modeller-9.12-r1.ebuild => modeller-9.12-r2.ebuild} | 3 ++-
2 files changed, 6 insertions(+), 1 deletion(-)
diff --git a/sci-chemistry/modeller/ChangeLog b/sci-chemistry/modeller/ChangeLog
index 2817f00..cedd72b 100644
--- a/sci-chemistry/modeller/ChangeLog
+++ b/sci-chemistry/modeller/ChangeLog
@@ -2,6 +2,10 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 26 Jun 2013; Justin Lecher <jlec@gentoo.org> -modeller-9.12-r1.ebuild,
+ +modeller-9.12-r2.ebuild:
+ Fix lib position, #474696
+
*modeller-9.12-r1 (18 Jun 2013)
18 Jun 2013; Justin Lecher <jlec@gentoo.org> -modeller-9.12.ebuild,
diff --git a/sci-chemistry/modeller/modeller-9.12-r1.ebuild b/sci-chemistry/modeller/modeller-9.12-r2.ebuild
similarity index 96%
rename from sci-chemistry/modeller/modeller-9.12-r1.ebuild
rename to sci-chemistry/modeller/modeller-9.12-r2.ebuild
index a25aa7f..9cfd2e3 100644
--- a/sci-chemistry/modeller/modeller-9.12-r1.ebuild
+++ b/sci-chemistry/modeller/modeller-9.12-r2.ebuild
@@ -7,7 +7,7 @@ EAPI=5
PYTHON_COMPAT=( python{2_6,2_7,3_2,3_3} )
PYTHON_COMPAT=( python{2_6,2_7} )
-inherit distutils-r1 eutils versionator
+inherit distutils-r1 eutils multilib versionator
DESCRIPTION="Homology or comparative modeling of protein three-dimensional structures"
HOMEPAGE="http://salilab.org/modeller/"
@@ -83,6 +83,7 @@ python_install_all(){
exeinto ${INPATH}/lib/${EXECTYPE}/
doexe lib/${EXECTYPE}/lib*
dosym libmodeller.so.8 ${INPATH}/lib/${EXECTYPE}/libmodeller.so
+ dosym ../../${INPATH}/lib/${EXECTYPE}/libmodeller.so.8 /usr/$(get_libdir)/libmodeller.so.8
use doc && HTML_DOCS=( doc/. )
distutils-r1_python_install_all
^ permalink raw reply related [flat|nested] 9+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-chemistry/modeller/
2013-06-26 14:45 Justin Lecher
@ 2013-06-26 14:55 ` Justin Lecher
0 siblings, 0 replies; 9+ messages in thread
From: Justin Lecher @ 2013-06-26 14:55 UTC (permalink / raw
To: gentoo-commits
commit: f663beb2c46742be193d69ca3abefddd81b0ef2b
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Wed Jun 26 14:40:11 2013 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jun 26 14:44:59 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f663beb2
sci-chemistry/modeller: Fix lib position, #474696
Package-Manager: portage-2.2.0_alpha184
---
sci-chemistry/modeller/ChangeLog | 4 ++++
.../modeller/{modeller-9.12-r1.ebuild => modeller-9.12-r2.ebuild} | 3 ++-
2 files changed, 6 insertions(+), 1 deletion(-)
diff --git a/sci-chemistry/modeller/ChangeLog b/sci-chemistry/modeller/ChangeLog
index 2817f00..cedd72b 100644
--- a/sci-chemistry/modeller/ChangeLog
+++ b/sci-chemistry/modeller/ChangeLog
@@ -2,6 +2,10 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 26 Jun 2013; Justin Lecher <jlec@gentoo.org> -modeller-9.12-r1.ebuild,
+ +modeller-9.12-r2.ebuild:
+ Fix lib position, #474696
+
*modeller-9.12-r1 (18 Jun 2013)
18 Jun 2013; Justin Lecher <jlec@gentoo.org> -modeller-9.12.ebuild,
diff --git a/sci-chemistry/modeller/modeller-9.12-r1.ebuild b/sci-chemistry/modeller/modeller-9.12-r2.ebuild
similarity index 96%
rename from sci-chemistry/modeller/modeller-9.12-r1.ebuild
rename to sci-chemistry/modeller/modeller-9.12-r2.ebuild
index a25aa7f..9cfd2e3 100644
--- a/sci-chemistry/modeller/modeller-9.12-r1.ebuild
+++ b/sci-chemistry/modeller/modeller-9.12-r2.ebuild
@@ -7,7 +7,7 @@ EAPI=5
PYTHON_COMPAT=( python{2_6,2_7,3_2,3_3} )
PYTHON_COMPAT=( python{2_6,2_7} )
-inherit distutils-r1 eutils versionator
+inherit distutils-r1 eutils multilib versionator
DESCRIPTION="Homology or comparative modeling of protein three-dimensional structures"
HOMEPAGE="http://salilab.org/modeller/"
@@ -83,6 +83,7 @@ python_install_all(){
exeinto ${INPATH}/lib/${EXECTYPE}/
doexe lib/${EXECTYPE}/lib*
dosym libmodeller.so.8 ${INPATH}/lib/${EXECTYPE}/libmodeller.so
+ dosym ../../${INPATH}/lib/${EXECTYPE}/libmodeller.so.8 /usr/$(get_libdir)/libmodeller.so.8
use doc && HTML_DOCS=( doc/. )
distutils-r1_python_install_all
^ permalink raw reply related [flat|nested] 9+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-chemistry/modeller/
@ 2013-09-20 16:02 Justin Lecher
0 siblings, 0 replies; 9+ messages in thread
From: Justin Lecher @ 2013-09-20 16:02 UTC (permalink / raw
To: gentoo-commits
commit: 8225d6ca03cbdfdf4a9a46bbc6a91d99a47f3d2e
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Fri Sep 20 16:01:12 2013 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri Sep 20 16:01:12 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=8225d6ca
sci-chemistry/modeller: Mask lib dir for revdep-rebuild, #474696
Package-Manager: portage-2.2.6
---
sci-chemistry/modeller/ChangeLog | 4 ++++
.../modeller/{modeller-9.12-r2.ebuild => modeller-9.12-r3.ebuild} | 7 +++++++
2 files changed, 11 insertions(+)
diff --git a/sci-chemistry/modeller/ChangeLog b/sci-chemistry/modeller/ChangeLog
index cedd72b..01374fb 100644
--- a/sci-chemistry/modeller/ChangeLog
+++ b/sci-chemistry/modeller/ChangeLog
@@ -2,6 +2,10 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 20 Sep 2013; Justin Lecher <jlec@gentoo.org> -modeller-9.12-r2.ebuild,
+ +modeller-9.12-r3.ebuild:
+ Mask lib dir for revdep-rebuild, #474696
+
26 Jun 2013; Justin Lecher <jlec@gentoo.org> -modeller-9.12-r1.ebuild,
+modeller-9.12-r2.ebuild:
Fix lib position, #474696
diff --git a/sci-chemistry/modeller/modeller-9.12-r2.ebuild b/sci-chemistry/modeller/modeller-9.12-r3.ebuild
similarity index 95%
rename from sci-chemistry/modeller/modeller-9.12-r2.ebuild
rename to sci-chemistry/modeller/modeller-9.12-r3.ebuild
index 9cfd2e3..a01b749 100644
--- a/sci-chemistry/modeller/modeller-9.12-r2.ebuild
+++ b/sci-chemistry/modeller/modeller-9.12-r3.ebuild
@@ -42,6 +42,7 @@ pkg_setup() {
python_prepare_all(){
sed "s:i386-intel8:${EXECTYPE}:g" -i src/swig/setup.py || die
+ distutils-r1_python_prepare_all
}
python_compile(){
@@ -92,6 +93,12 @@ python_install_all(){
insinto /usr/share/${PN}/
doins -r examples
fi
+
+ insinto /etc/revdep-rebuild
+ cat >> "${T}"/40-${PN} <<- EOF
+ SEARCH_DIRS_MASK="${EPREFIX}/opt/modeller/lib/"
+ EOF
+ doins "${T}"/40-${PN}
}
pkg_postinst() {
^ permalink raw reply related [flat|nested] 9+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-chemistry/modeller/
@ 2015-12-25 21:00 Marius Brehler
0 siblings, 0 replies; 9+ messages in thread
From: Marius Brehler @ 2015-12-25 21:00 UTC (permalink / raw
To: gentoo-commits
commit: 6a4ee29993df09aac52f5bff1f0cbdb919956176
Author: Marius Brehler <marbre <AT> linux <DOT> sungazer <DOT> de>
AuthorDate: Fri Dec 25 20:51:51 2015 +0000
Commit: Marius Brehler <marbre <AT> linux <DOT> sungazer <DOT> de>
CommitDate: Fri Dec 25 20:51:51 2015 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=6a4ee299
sci-chemistry/modeller: Fix minorsyn, add missing dies
Package-Manager: portage-2.2.24
sci-chemistry/modeller/ChangeLog | 7 +++++--
sci-chemistry/modeller/modeller-9.12-r3.ebuild | 9 ++++-----
2 files changed, 9 insertions(+), 7 deletions(-)
diff --git a/sci-chemistry/modeller/ChangeLog b/sci-chemistry/modeller/ChangeLog
index b7e8269..21f01f8 100644
--- a/sci-chemistry/modeller/ChangeLog
+++ b/sci-chemistry/modeller/ChangeLog
@@ -1,7 +1,11 @@
# ChangeLog for sci-chemistry/modeller
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
# $Id$
+ 25 Dec 2015; Marius Brehler <marbre@linux.sungazer.de>
+ modeller-9.12-r3.ebuild:
+ sci-chemistry/modeller: Fix minorsyn, add missing dies
+
20 Sep 2013; Justin Lecher <jlec@gentoo.org> -modeller-9.12-r2.ebuild,
+modeller-9.12-r3.ebuild:
Mask lib dir for revdep-rebuild, #474696
@@ -32,4 +36,3 @@
09 Apr 2008; Jeff Gardner <je_fro@gentoo.org> +modeller-9.3.ebuild:
Initial import, added MY_PV, thanks to the prolific Justin Schmitz
-
diff --git a/sci-chemistry/modeller/modeller-9.12-r3.ebuild b/sci-chemistry/modeller/modeller-9.12-r3.ebuild
index c1a5d81..79c68ad 100644
--- a/sci-chemistry/modeller/modeller-9.12-r3.ebuild
+++ b/sci-chemistry/modeller/modeller-9.12-r3.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
@@ -27,7 +27,6 @@ INPATH="${EPREFIX}"/opt/modeller${ver}
QA_PREBUILT="/opt/*"
-
pkg_setup() {
case ${ARCH} in
x86)
@@ -45,18 +44,18 @@ python_prepare_all(){
}
python_compile(){
- cd src/swig
+ cd src/swig || die
swig -python -keyword -nodefaultctor -nodefaultdtor -noproxy modeller.i || die
distutils-r1_python_compile
}
python_install() {
- cd src/swig
+ cd src/swig || die
distutils-r1_python_install
}
python_install_all(){
- cd "${S}"
+ cd "${S}" || die
sed \
-e "/^EXECUTABLE_TYPE/s:xxx:${EXECTYPE}:g" \
-e "/MODINSTALL/s:xxx:\"${INPATH}\":g" \
^ permalink raw reply related [flat|nested] 9+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-chemistry/modeller/
@ 2016-10-29 9:36 Justin Lecher
0 siblings, 0 replies; 9+ messages in thread
From: Justin Lecher @ 2016-10-29 9:36 UTC (permalink / raw
To: gentoo-commits
commit: c62805bf0429d30a26d716c011f3450f7044fd93
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Oct 29 09:36:39 2016 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Oct 29 09:36:39 2016 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=c62805bf
sci-chemistry/modeller: Drop obsolete Python impl
Bump EAPI
Package-Manager: portage-2.3.2
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
sci-chemistry/modeller/modeller-9.12-r3.ebuild | 7 +++----
1 file changed, 3 insertions(+), 4 deletions(-)
diff --git a/sci-chemistry/modeller/modeller-9.12-r3.ebuild b/sci-chemistry/modeller/modeller-9.12-r3.ebuild
index 79c68ad..6e8897d 100644
--- a/sci-chemistry/modeller/modeller-9.12-r3.ebuild
+++ b/sci-chemistry/modeller/modeller-9.12-r3.ebuild
@@ -1,11 +1,10 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2016 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
-EAPI=5
+EAPI=6
-PYTHON_COMPAT=( python{2_7,3_3} )
-PYTHON_COMPAT=( python{2_6,2_7} )
+PYTHON_COMPAT=( python2_7 )
inherit distutils-r1 eutils multilib versionator
^ permalink raw reply related [flat|nested] 9+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-chemistry/modeller/
@ 2018-04-06 13:29 Alexey Shvetsov
0 siblings, 0 replies; 9+ messages in thread
From: Alexey Shvetsov @ 2018-04-06 13:29 UTC (permalink / raw
To: gentoo-commits
commit: 3139caf52e0992237882384ac30c2e8ab7c5946d
Author: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Fri Apr 6 13:29:17 2018 +0000
Commit: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Fri Apr 6 13:29:17 2018 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=3139caf5
sci-chemistry/modeller: Version bump
Package-Manager: Portage-2.3.28, Repoman-2.3.9
sci-chemistry/modeller/modeller-9.19.ebuild | 145 ++++++++++++++++++++++++++++
1 file changed, 145 insertions(+)
diff --git a/sci-chemistry/modeller/modeller-9.19.ebuild b/sci-chemistry/modeller/modeller-9.19.ebuild
new file mode 100644
index 000000000..0d29c3843
--- /dev/null
+++ b/sci-chemistry/modeller/modeller-9.19.ebuild
@@ -0,0 +1,145 @@
+# Copyright 1999-2018 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+PYTHON_COMPAT=( python2_7 )
+
+inherit distutils-r1 eutils multilib versionator
+
+DESCRIPTION="Homology or comparative modeling of protein three-dimensional structures"
+HOMEPAGE="http://salilab.org/modeller/"
+SRC_URI="http://salilab.org/${PN}/${PV}/${P}.tar.gz"
+
+LICENSE="modeller"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="doc examples"
+SLOT="0"
+
+RESTRICT="mirror"
+
+DEPEND=">=dev-lang/swig-1.3"
+RDEPEND=""
+
+INPATH="${EPREFIX}"/opt/modeller${ver}
+
+QA_PREBUILT="/opt/*"
+
+pkg_setup() {
+ case ${ARCH} in
+ x86)
+ EXECTYPE="i386-intel8";;
+ amd64)
+ EXECTYPE="x86_64-intel8";;
+ *)
+ die "Your arch "${ARCH}" does not appear supported at this time.";;
+ esac
+}
+
+python_prepare_all(){
+ sed "s:i386-intel8:${EXECTYPE}:g" -i src/swig/setup.py || die
+ distutils-r1_python_prepare_all
+}
+
+python_compile(){
+ cd src/swig || die
+ swig -python -keyword -nodefaultctor -nodefaultdtor -noproxy modeller.i || die
+ distutils-r1_python_compile
+}
+
+python_install() {
+ cd src/swig || die
+ distutils-r1_python_install
+}
+
+python_install_all(){
+ cd "${S}" || die
+ sed \
+ -e "/^EXECUTABLE_TYPE/s:xxx:${EXECTYPE}:g" \
+ -e "/MODINSTALL/s:xxx:\"${INPATH}\":g" \
+ -i bin/modscript || die
+
+ sed -e "s;@TOPDIR\@;\"${INPATH}\";" \
+ -e "s;@EXETYPE\@;${EXECTYPE};" \
+ bin/modpy.sh.in > "${T}/modpy.sh"
+
+ insinto ${INPATH}
+ doins -r modlib
+ python_foreach_impl python_domodule modlib/modeller
+
+ insinto ${INPATH}/bin
+ doins -r bin/{lib,*top}
+
+ exeinto ${INPATH}/bin
+ doexe bin/{modscript,mod${PV}_${EXECTYPE}} "${T}"/modpy.sh
+
+ python_foreach_impl python_doscript bin/modslave.py
+ dosym ${INPATH}/bin/modscript /opt/bin/mod${PV}
+ dosym ${INPATH}/bin/modpy.sh /opt/bin/modpy.sh
+
+ exeinto ${INPATH}/lib/${EXECTYPE}/
+ doexe lib/${EXECTYPE}/lib*
+ dosym libmodeller.so.8 ${INPATH}/lib/${EXECTYPE}/libmodeller.so
+ dosym ../../${INPATH}/lib/${EXECTYPE}/libmodeller.so.8 /usr/$(get_libdir)/libmodeller.so.8
+
+ use doc && HTML_DOCS=( doc/. )
+ distutils-r1_python_install_all
+
+ if use examples; then
+ insinto /usr/share/${PN}/
+ doins -r examples
+ fi
+
+ insinto /etc/revdep-rebuild
+ cat >> "${T}"/40-${PN} <<- EOF
+ SEARCH_DIRS_MASK="${EPREFIX}/opt/modeller/lib/"
+ EOF
+ doins "${T}"/40-${PN}
+}
+
+pkg_postinst() {
+ if [[ ! -e "${INPATH}/modlib/modeller/config.py" ]]; then
+ echo install_dir = \"${INPATH}/\"> ${INPATH}/modlib/modeller/config.py
+ fi
+
+ if grep -q license ${INPATH}/modlib/modeller/config.py; then
+ einfo "A license key file is already present in ${IN_PATH}/modlib/modeller/config.py"
+ else
+ ewarn "Obtain a license Key from"
+ ewarn "http://salilab.org/modeller/registration.html"
+ ewarn "And run this before using modeller:"
+ ewarn "emerge --config =${CATEGORY}/${PF}"
+ ewarn "That way you can [re]enter your license key."
+ fi
+}
+
+pkg_postrm() {
+ ewarn "This package leaves a license Key file in ${INPATH}/modlib/modeller/config.py"
+ ewarn "that you need to remove to completely get rid of modeller."
+}
+
+pkg_config() {
+ ewarn "Your license key is NOT checked for validity here."
+ ewarn " Make sure you type it in correctly."
+ eerror "If you CTRL+C out of this, modeller will not run!"
+ while true
+ do
+ einfo "Please enter your license key:"
+ read license_key1
+ einfo "Please re-enter your license key:"
+ read license_key2
+ if [[ "$license_key1" == "" ]]
+ then
+ echo "You entered a blank license key. Try again."
+ else
+ if [[ "$license_key1" == "$license_key2" ]]
+ then
+ echo license = '"'$license_key1'"' >> "${INPATH}/modlib/modeller/config.py"
+ einfo "Thank you!"
+ break
+ else
+ eerror "Your license key entries do not match. Try again."
+ fi
+ fi
+ done
+}
^ permalink raw reply related [flat|nested] 9+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-chemistry/modeller/
@ 2020-12-31 11:54 Aisha Tammy
0 siblings, 0 replies; 9+ messages in thread
From: Aisha Tammy @ 2020-12-31 11:54 UTC (permalink / raw
To: gentoo-commits
commit: a68694f10db89263ecb947ed63382433da73dc84
Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Thu Dec 31 11:46:01 2020 +0000
Commit: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Thu Dec 31 11:53:54 2020 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=a68694f1
sci-chemistry/modeller: make repoman happier
The patch is still too big, but at least now it
doesn't complain about missing deps
Package-Manager: Portage-3.0.12, Repoman-3.0.2
RepoMan-Options: --force
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
Closes: https://github.com/gentoo/sci/pull/1016
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>
sci-chemistry/modeller/modeller-9.25.ebuild | 5 ++---
1 file changed, 2 insertions(+), 3 deletions(-)
diff --git a/sci-chemistry/modeller/modeller-9.25.ebuild b/sci-chemistry/modeller/modeller-9.25.ebuild
index cf3af567e..8db00ea11 100644
--- a/sci-chemistry/modeller/modeller-9.25.ebuild
+++ b/sci-chemistry/modeller/modeller-9.25.ebuild
@@ -3,7 +3,7 @@
EAPI=7
-PYTHON_COMPAT=( python3_{6,7,8,9} )
+PYTHON_COMPAT=( python3_{7,8,9} )
inherit distutils-r1 eutils multilib
@@ -12,14 +12,13 @@ HOMEPAGE="https://salilab.org/modeller/"
SRC_URI="https://salilab.org/${PN}/${PV}/${P}.tar.gz"
LICENSE="modeller"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+KEYWORDS="~amd64 ~x86"
IUSE="doc examples"
SLOT="0"
RESTRICT="mirror"
DEPEND=">=dev-lang/swig-1.3"
-RDEPEND=""
INPATH="${EPREFIX}"/opt/modeller${ver}
^ permalink raw reply related [flat|nested] 9+ messages in thread
end of thread, other threads:[~2020-12-31 11:55 UTC | newest]
Thread overview: 9+ messages (download: mbox.gz follow: Atom feed
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2015-12-25 21:00 [gentoo-commits] proj/sci:master commit in: sci-chemistry/modeller/ Marius Brehler
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2020-12-31 11:54 Aisha Tammy
2018-04-06 13:29 Alexey Shvetsov
2016-10-29 9:36 Justin Lecher
2013-09-20 16:02 Justin Lecher
2013-06-26 14:53 Justin Lecher
2013-06-26 14:45 Justin Lecher
2013-06-26 14:55 ` Justin Lecher
2013-06-18 12:46 Justin Lecher
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