public inbox for gentoo-commits@lists.gentoo.org
 help / color / mirror / Atom feed
From: "Martin Mokrejs" <mmokrejs@fold.natur.cuni.cz>
To: gentoo-commits@lists.gentoo.org
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/ngs_backbone/
Date: Sat,  2 May 2015 16:29:23 +0000 (UTC)	[thread overview]
Message-ID: <1430583109.7fb9ac3743cb1d1a58d5f79e27895985245dd11e.mmokrejs@gentoo> (raw)

commit:     7fb9ac3743cb1d1a58d5f79e27895985245dd11e
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sat May  2 16:11:49 2015 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Sat May  2 16:11:49 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=7fb9ac37

added PYTHON_USEDEP

Package-Manager: portage-2.2.18

 sci-biology/ngs_backbone/ChangeLog                |  6 +++++-
 sci-biology/ngs_backbone/ngs_backbone-9999.ebuild | 14 +++++++-------
 2 files changed, 12 insertions(+), 8 deletions(-)

diff --git a/sci-biology/ngs_backbone/ChangeLog b/sci-biology/ngs_backbone/ChangeLog
index 231e153..463e8e5 100644
--- a/sci-biology/ngs_backbone/ChangeLog
+++ b/sci-biology/ngs_backbone/ChangeLog
@@ -1,7 +1,11 @@
 # ChangeLog for sci-biology/ngs_backbone
-# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  02 May 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+  ngs_backbone-9999.ebuild:
+  added PYTHON_USEDEP
+
   12 Sep 2014; Christoph Junghans <ottxor@gentoo.org> ngs_backbone-9999.ebuild:
   drop ~x86 as deps are missing
 

diff --git a/sci-biology/ngs_backbone/ngs_backbone-9999.ebuild b/sci-biology/ngs_backbone/ngs_backbone-9999.ebuild
index 1b4b65b..b2de334 100644
--- a/sci-biology/ngs_backbone/ngs_backbone-9999.ebuild
+++ b/sci-biology/ngs_backbone/ngs_backbone-9999.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
@@ -26,21 +26,21 @@ IUSE=""
 
 DEPEND=""
 RDEPEND="${DEPEND}
-	sci-biology/biopython
-	sci-biology/samtools
+	sci-biology/biopython[${PYTHON_USEDEP}]
+	sci-biology/samtools[${PYTHON_USEDEP}]
 	sci-biology/picard
 	sci-biology/mira
 	sci-biology/bwa
 	sci-biology/gatk
-	sci-biology/pysam
+	sci-biology/pysam[${PYTHON_USEDEP}]
 	sci-biology/estscan
 	sci-biology/ncbi-tools
 	sci-biology/lucy
 	sci-biology/gmap
 	sci-biology/emboss
-	dev-python/matplotlib
-	dev-python/psubprocess
-	dev-python/configobj"
+	dev-python/matplotlib[${PYTHON_USEDEP}]
+	dev-python/psubprocess[${PYTHON_USEDEP}]
+	dev-python/configobj[${PYTHON_USEDEP}]"
 	# ( blast2GO || b2g4pipe )
 	# sci-biology/sputnik
 	# sci-biology/gsnap


             reply	other threads:[~2015-05-02 16:29 UTC|newest]

Thread overview: 5+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2015-05-02 16:29 Martin Mokrejs [this message]
  -- strict thread matches above, loose matches on Subject: below --
2020-09-27  8:02 [gentoo-commits] proj/sci:master commit in: sci-biology/ngs_backbone/ Horea Christian
2016-02-14 17:32 Justin Lecher
2014-09-12 17:22 Christoph Junghans
2014-03-24 11:58 Martin Mokrejs

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=1430583109.7fb9ac3743cb1d1a58d5f79e27895985245dd11e.mmokrejs@gentoo \
    --to=mmokrejs@fold.natur.cuni.cz \
    --cc=gentoo-commits@lists.gentoo.org \
    --cc=gentoo-dev@lists.gentoo.org \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body.
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox