From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id AB992138C9D for ; Fri, 17 Apr 2015 23:56:45 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 13E98E0908; Fri, 17 Apr 2015 23:56:43 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id A615BE0924 for ; Fri, 17 Apr 2015 23:56:41 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id EFA4C3409D0 for ; Fri, 17 Apr 2015 23:56:40 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id C4BF616277 for ; Fri, 17 Apr 2015 23:56:33 +0000 (UTC) From: "Martin Mokrejs" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Martin Mokrejs" Message-ID: <1429312697.e4e5c84b2835673ceac3607cf84dc0d68c3bcfe6.mmokrejs@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/eval/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/eval/ChangeLog sci-biology/eval/eval-2.2.8.ebuild X-VCS-Directories: sci-biology/eval/ X-VCS-Committer: mmokrejs X-VCS-Committer-Name: Martin Mokrejs X-VCS-Revision: e4e5c84b2835673ceac3607cf84dc0d68c3bcfe6 X-VCS-Branch: master Date: Fri, 17 Apr 2015 23:56:33 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 9de80bb7-dbbd-41fd-aa4a-38edca06a84e X-Archives-Hash: da751f98bd87beb108936280395a8ebf commit: e4e5c84b2835673ceac3607cf84dc0d68c3bcfe6 Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Fri Apr 17 23:18:17 2015 +0000 Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Fri Apr 17 23:18:17 2015 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=e4e5c84b sci-biology/eval: fixed installation of perl-related files Package-Manager: portage-2.2.18 sci-biology/eval/ChangeLog | 3 +++ sci-biology/eval/eval-2.2.8.ebuild | 23 ++++++++++++----------- 2 files changed, 15 insertions(+), 11 deletions(-) diff --git a/sci-biology/eval/ChangeLog b/sci-biology/eval/ChangeLog index 34f2faa..7de843d 100644 --- a/sci-biology/eval/ChangeLog +++ b/sci-biology/eval/ChangeLog @@ -2,6 +2,9 @@ # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ + 17 Apr 2015; Martin Mokrejs eval-2.2.8.ebuild: + sci-biology/eval: fixed installation of perl-related files + 19 Mar 2015; Martin Mokrejs eval-2.2.8.ebuild: removing KEYWORDS until the perl files are installed to some other place. At the moment I get: 'perl-module.eclass: Suspicious environment values found. diff --git a/sci-biology/eval/eval-2.2.8.ebuild b/sci-biology/eval/eval-2.2.8.ebuild index 77a8076..c6ddde2 100644 --- a/sci-biology/eval/eval-2.2.8.ebuild +++ b/sci-biology/eval/eval-2.2.8.ebuild @@ -4,17 +4,20 @@ EAPI=5 +PERL_EXPORT_PHASE_FUNCTIONS=no +inherit perl-module eutils toolchain-funcs + DESCRIPTION="Validate, compare and draw summary statistics for GTF files" HOMEPAGE="http://mblab.wustl.edu/software.html" LICENSE="GPL-2+" SLOT="0" -KEYWORDS="" +KEYWORDS="~amd64" IUSE="" SRC_URI="http://mblab.wustl.edu/software/download/"${PN}"-"${PV}".tar.gz http://mblab.wustl.edu/software/download/eval-documentation.pdf" -DEPEND="dev-lang/perl +DEPEND=" dev-lang/tk sci-biology/vcftools sci-visualization/gnuplot" @@ -25,16 +28,14 @@ src_install(){ dobin *.pl *.py dodoc "${DISTDIR}"/eval-documentation.pdf dodoc help/*.ps - insinto /usr/share/eval + insinto /usr/share/${PN} doins *.gtf - eval `perl '-V:installvendorlib'` - vendor_lib_install_dir="${installvendorlib}" - dodir ${vendor_lib_install_dir}/eval - insinto ${vendor_lib_install_dir}/eval + perl_set_version + insinto ${VENDOR_LIB} doins *.pm - echo "PERL5LIB="${vendor_lib_install_dir}"/eval" > ${S}"/99eval" - doenvd ${S}"/99eval" || die } -# the version of validate_gtf.pl bundled with eval differs a bit from -# validate_gtf-1.0.pl from http://mblab.wustl.edu/software.html#validategtf +pkg_postinst(){ + ewarn "The version of validate_gtf.pl bundled with eval differs a bit from" + ewarn "validate_gtf-1.0.pl from http://mblab.wustl.edu/software.html#validategtf" +}